Serratia marcescens WW4: SMWW4_v1c10500
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Entry
SMWW4_v1c10500 CDS
T02448
Symbol
smdA
Name
(GenBank) multidrug efflux pump SmdA
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
smw
Serratia marcescens WW4
Pathway
smw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SMWW4_v1c10500 (smdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smw02000
]
SMWW4_v1c10500 (smdA)
Transporters [BR:
smw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SMWW4_v1c10500 (smdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
Rad17
AAA_18
TsaE
AAA_23
NB-ARC
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AGE16854
LinkDB
All DBs
Position
1164609..1166384
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AA seq
591 aa
AA seq
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MRLFAQIGWYFRREWRRYLGAVVLLIVIAILQLLPPKLVGIIVDGVTEKQMSTGVLLAWL
GLMIGTAIVVYLLRYVWRVLLFGASYQLAVELRENFYRQLSRQNPAFYLRHRTGDLMARA
TNDVDRVVFAAGEGVLTLVDSLVMGVVVLVVMSTQISWQLTVLALIPMPLMAIAIKYYGD
QLHQRFKSAQAAFSSLNDQAQESMTSIRMIKAFGLEDHQSNRFADVAAQTGAKNMHVARV
DARFDPTIYIAIGASNLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYSRIRSLLDEAPAVQDGPQALPAGRGVLEVDIRAFHYPENPHPALHDVALTLK
PGQMLGLCGPTGAGKSTLLSLIQRQFDVDQGQIRYHGLPLPQVKLDDWRSRLSVVSQTPF
LFSDTVANNIALGQPGATQAQIEQAARLASVHEDILRLPQGYDTEVGERGVMLSGGQKQR
ISIARALLLDAEILILDDALSAVDGRTEHQILHNLRSWGQDRTVIISAHRLSALTEASEI
LVMQHGGVAQRGDPAALAAQPGWYRDMYRYQQLEAALDEAPENGEEALADE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgagattatttgcacaaatcggctggtacttccgccgggagtggcgccgctacctcggg
gcggtggtgctgctgatcgtcatcgccatcctgcaactgttgccgcctaagctggtcggc
atcatcgtggatggcgtcaccgaaaaacagatgtccaccggcgtgctgttggcctggctc
gggctgatgatcggcaccgcgatagtcgtttacctgctgcgctatgtgtggcgggtgctg
ctgttcggcgcttcctaccagctggcggtcgaactgcgcgaaaacttttaccgccagctc
agccgacaaaacccggcgttctacctgcgccatcgcaccggcgacctgatggcgcgcgcc
accaacgatgtggatcgcgtggtgttcgccgccggtgaaggcgtgctgacgttggtggat
tcgctggtgatgggggtggtggtgctggtggtgatgagcacccaaatcagctggcagctg
acggtgttggcgttaatcccgatgccgctgatggcgatcgccatcaaatattacggcgac
cagctgcaccagcgctttaaatcggcgcaggcggcgttttccagcctgaacgatcaggcg
caggaaagcatgaccagcatccgcatgatcaaggccttcgggctggaagatcaccaatcc
aaccgtttcgccgacgtcgcggcgcagaccggggccaagaacatgcacgtggcgcgggtg
gatgcgcgcttcgatccgaccatttatatcgccatcggcgcctctaacctgttggctatc
ggcggcggcagctggatggtagtgaacggttcgctgacgctcgggcaactgaccagcttt
gtgatgtacctcggcctgatgatctggccaatgctggcgctggcctggatgttcaatatc
gtcgagcgcggcagcgcggcctacagccgcatccgcagcctgctcgacgaggcgccggcg
gtgcaggatggcccgcaggcgttgccggccgggcgcggcgtgctggaggtggatatccgc
gcgttccactacccggaaaacccgcatccggcgctgcacgatgtggcgctgacgctgaaa
ccagggcaaatgctggggctgtgcgggccgaccggggccggcaaatcgacgctgctgtcg
ctgatccagcgccagttcgacgtcgatcaagggcagatccgctatcacggcctgccgttg
ccgcaggtcaaactcgacgactggcgttcgcggctgtcggtggtgagccaaacgccgttc
ctgttctccgataccgtggcgaacaacatcgcgctgggccagccgggggcgacgcaggcg
cagattgaacaggcggcgcggctggccagcgtccatgaggacattctgcggctgccgcag
ggctatgacaccgaggtgggcgaacgcggcgtgatgctgtcgggcgggcagaaacagcgc
atctccatcgcgcgcgcgctgctgctggatgcggagatcctgatcctcgacgatgcgcta
tcggcggtggatggccgtaccgaacaccagatcctgcacaacctgcgtagctgggggcaa
gatcgcacggtgatcatcagcgcacaccggctgtcggcattaaccgaggccagcgaaatc
ctggtgatgcagcacggcggcgtggcgcagcgcggcgatccggcggcgctggcggcgcag
ccgggctggtatcgcgatatgtaccgctatcagcagctggaagcggcgctggacgaagcg
ccggaaaacggcgaggaggcgttggccgatgaataa
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