Serratia marcescens WW4: SMWW4_v1c10870
Help
Entry
SMWW4_v1c10870 CDS
T02448
Name
(GenBank) penicillin binding protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
smw
Serratia marcescens WW4
Pathway
smw00550
Peptidoglycan biosynthesis
smw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMWW4_v1c10870
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smw01002
]
SMWW4_v1c10870
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
SMWW4_v1c10870
Enzymes [BR:
smw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SMWW4_v1c10870
Peptidases and inhibitors [BR:
smw01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SMWW4_v1c10870
Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SMWW4_v1c10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AGE16891
LinkDB
All DBs
Position
1205971..1207437
Genome browser
AA seq
488 aa
AA seq
DB search
MLKTAGWLLPAIVALAGCSSSGQRHEQTLSQALAAIGQDKALVGASSGVMVRDAESGKVL
YQAHADQRLAPASNMKMFTSLAAFGVLGADYRFETRLLTAGEQRGDTLRGDLYLQGSGDP
TLHPDDLDTFAAALAQRGIRHIQGRLLLDAGAFDQTPFGAGWSWDDEPFAFAAPISALNY
AFTPGGDINVVQVAVRPGARAGAPGRVSFYPANDAVTLVNRTTTGSDTALTYERRPGSNR
IVVSGTIAAQAEASSRLITVDQPSLVVGALLQHALRAHGITLRGKVEEGVTPAGAQLLAE
KTSPPLSRLVVTFLKVSNNGYGEILTKAMGRKTQGKGDWAAGLQAINGFVQSQGVAADAY
RQVDGSGLSRMNQITPQQLTTLLLAARKQPWFADWYHALPVAGEPGLLVGGTLQSRMVNS
AAAGRAHAKSGSMTGVSSLSGYVDSATGRPLAFAIISNNYLVPGAQVKALEDRLVETLAA
CDATVVCR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaccgcaggctggctgctgcccgccatcgtggcgctggcggggtgttcgtca
tccggccaacgtcacgaacaaaccctcagccaggcgctggcggccatcggccaggacaag
gcgctggttggggcgtcgagcggcgtgatggtgcgcgatgccgagagtggcaaggtgctg
tatcaggcgcacgcggatcagcgtttggcgccggcttccaacatgaagatgttcacttct
ctggcggcgttcggcgtgctgggggccgattatcgctttgaaacccggctgttgaccgcc
ggcgagcagcgcggcgacaccttgcgaggggatctctatctgcagggcagcggtgacccg
acgctgcatccggacgatctcgacaccttcgccgcagcgctggcacagcgcggcatccgt
catatacaggggcggttgttgctggatgccggcgccttcgatcagacgcctttcggcgcc
ggttggagctgggacgatgaacctttcgccttcgctgcgccgatctcggcgctgaactac
gcctttactcccggcggcgatatcaacgtggtgcaggtggcggtgcggccgggcgcccgc
gccggcgcgccgggacgggtgagcttctatcccgccaatgacgcggtgacgctggtcaac
cgcaccaccaccggtagtgacaccgcgctgacgtacgagcgccggccgggcagcaaccgg
atcgtggtcagcggcaccatcgccgcgcaggcggaggccagctcgcgattgattaccgtc
gatcaaccgtcccttgtcgtcggcgctttattgcaacatgctctgcgcgcgcacggcatc
accctgcgcggcaaggttgaagagggcgtgacgccggccggcgcacagctgctggcggaa
aaaacctcgccgccgctctcccgcctggtcgtcaccttcctgaaagtctccaataacggc
tacggcgagatattgaccaaggcgatgggccgcaagacgcagggtaaaggggattgggcc
gccggccttcaggcgataaacggatttgtgcaaagccagggcgtcgcggccgacgcgtat
cgccaggtggacggttccgggctgtcgcgcatgaaccaaatcacgccgcagcagctgacg
acgctgctgctggcggccagaaaacagccgtggtttgccgactggtatcacgccttgccc
gtcgcgggcgagccggggttgctggtgggcggcacgctgcaaagccgcatggtgaacagc
gcggcggcggggcgcgcccacgccaagagcggttccatgaccggcgtatcgtcgctcagc
ggctatgtcgattcggcgaccgggcggccgctggcattcgccatcatcagcaataactat
ctggtgcccggcgcgcaggtgaaggcgctggaggaccgcctggtggagacgctggcggcc
tgtgacgccacggtggtgtgccgctga
DBGET
integrated database retrieval system
