Serratia marcescens WW4: SMWW4_v1c11080
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Entry
SMWW4_v1c11080 CDS
T02448
Symbol
allS
Name
(GenBank) DNA-binding transcriptional activator of the allD operon
KO
K10972
LysR family transcriptional regulator, transcriptional activator of the allD operon
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c11080 (allS)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMWW4_v1c11080 (allS)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGE16912
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All DBs
Position
complement(1235207..1236121)
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AA seq
304 aa
AA seq
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MLDHETIRSFIKVAECQSFSRAAELLHKTTATISYRIKTLEESIGTQLFIRTTRTVNLTP
AGEYLLERCRQWHTWLDAMPGELRQINDGVEHQVNIVINNLLYDAAAVAGLLTHLHDKYP
FTQFHISRQVYMGVWDALLNEDCHLAIGAAGNESLENSIKVLPLGKIDWVFAISPTHPLA
VAADPLNETQLRPYAAINVEDTARHLAKRTAWLLSGQQEIKVPDLRTKLECHLRGLGIGF
LPRQLCQTYLDSGELVAKQLRYPRQPSPLSLAWSDARGGEAVRTLISLFQTRDPLIAGLV
SALD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcacgaaaccattcgttcgtttatcaaagttgccgagtgccaaagcttctcg
cgcgcggcagagttgctgcataaaaccaccgccaccatcagctaccgcattaaaacgctg
gaagagagcatcggcacgcagctgtttatccgcaccacccgcaccgtcaacctgacgccg
gccggggagtatttgctggagcgctgccgccagtggcacacctggctggacgccatgccg
ggcgaactgcggcaaatcaacgatggcgtagagcatcaggtgaatatcgtgatcaacaac
ctgctgtacgacgccgccgccgtagccgggctgttgactcacctgcacgacaaatacccg
ttcacccaattccacatttcccgccaggtgtacatgggcgtgtgggacgcgctgctgaat
gaggattgccatctggcgatcggcgcggcgggcaatgaatcgctggaaaacagcatcaag
gtgctgccgctcggcaagatcgattgggtgttcgccatttcgccgacgcatccgctggcc
gttgccgccgatccgttgaacgaaacgcagctgcgcccttatgccgcaatcaacgtcgaa
gataccgcgcgccatctggccaagcgtaccgcctggttgctgtccggccagcaggagatc
aaggtgccggatctgcgcaccaagctggaatgccatctgcgcggtctcgggatcggtttc
cttccgcgccagctgtgccaaacttatcttgatagcggcgaattggtggccaagcagctc
agatatccgcgccaaccttcacccctgtcgctggcctggtccgatgctcgcggcggcgaa
gcggtgcgcaccctgatcagcctgttccagacgcgggatccgttaatcgcgggtttggtc
agcgccctggattaa
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