Serratia marcescens WW4: SMWW4_v1c11660
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Entry
SMWW4_v1c11660 CDS
T02448
Symbol
dacA
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00550
Peptidoglycan biosynthesis
smw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMWW4_v1c11660 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smw01002
]
SMWW4_v1c11660 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
SMWW4_v1c11660 (dacA)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SMWW4_v1c11660 (dacA)
Peptidases and inhibitors [BR:
smw01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SMWW4_v1c11660 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SMWW4_v1c11660 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AGE16970
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All DBs
Position
complement(1290726..1291937)
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AA seq
403 aa
AA seq
DB search
MKQVTSFRLIKSIALGTVIAMSAASVAHADDVNIKTMIPGVPQIDAEAYILIDYNSGKVL
AEMNADARRDPASLTKMMTSYVIGQALKAGKIGQDDLVTVGQDAWATGNPVFKGSSLMFL
KPGDRVPVSKLTRGINLQSGNDACVAMADYVAGSQDAFVNLMNTYVSKLGLQNTHFQTVH
GLDAQGQYSSARDMALIGQALIRDVPEEYAIYKEKEFTFNNIRQMNRNGLLWDNSLNVDG
IKTGHTDAAGYNLVASATEGQMRLISAVMGGRTYKGREAESKKLLTWGFRFFETVAPLKV
GKEFASEPVWFGDADRVELGVDKDVYLTIPRGRMKDLKASYVLNTPEIHAPLAKNQVVGS
INFQLDGKTIDQRPLVVMNEVKEGGFFSRIVDYIKLMFHHWFG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtaacttcttttcgcttaatcaaaagcatcgcactcggcaccgttatcgca
atgagcgcagcctccgttgcacatgccgatgacgttaacatcaaaaccatgatcccaggt
gtcccgcagatcgatgcggaagcgtacatcctgattgattacaactccggcaaggtgctg
gccgagatgaacgccgatgcgcgtcgcgatccggccagcctgaccaaaatgatgaccagc
tatgtcatcggccaggcgctgaaagcgggtaaaatcggccaggacgatctggtgaccgtc
ggccaggacgcctgggcgaccggcaacccggtgttcaaaggttcctcgctgatgttcctg
aagccgggcgatcgcgtgccggtctccaaactgacccgcggcatcaacctgcagtccggt
aacgacgcctgcgtggcgatggccgactacgtcgccggcagccaggatgcgttcgtcaac
ctgatgaacacctacgtcagcaagctgggcctgcagaacactcacttccagacggtacac
ggcctggatgcccagggccagtacagctcggcgcgcgacatggcgctgatcggccaggcg
ctgatccgcgacgtgccggaagagtacgcgatttacaaagaaaaagagttcactttcaac
aatatccgccagatgaaccgcaacggtctgctgtgggataacagcctgaacgtcgacggc
atcaaaaccggccacaccgacgcggcgggttacaacctggtggcttcggcgaccgaaggc
cagatgcgtctgatctccgccgtgatgggcggccgcacctacaaaggccgcgaagccgag
agcaagaaactgctgacctggggcttccgcttcttcgaaaccgtggcgccgctgaaagtc
ggtaaagagttcgcctccgagccggtctggttcggcgatgccgaccgcgttgagctgggc
gtggataaagacgtctacctgaccatcccgcgcggccgcatgaaagatctgaaggccagc
tatgtgctgaacacgccggaaattcacgcgccgctggcgaaaaaccaggtggtgggcagc
atcaacttccagctggacggcaaaaccatcgaccagcgtccgctggtggtgatgaacgaa
gtgaaagaaggtggtttcttcagccgcatcgtggactacatcaaactgatgttccaccac
tggttcggttaa
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