Serratia marcescens WW4: SMWW4_v1c12290
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Entry
SMWW4_v1c12290 CDS
T02448
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00020
Citrate cycle (TCA cycle)
smw00190
Oxidative phosphorylation
smw00650
Butanoate metabolism
smw00720
Other carbon fixation pathways
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
smw01200
Carbon metabolism
Module
smw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smw_M00149
Succinate dehydrogenase, prokaryotes
smw_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SMWW4_v1c12290 (sdhA)
00650 Butanoate metabolism
SMWW4_v1c12290 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SMWW4_v1c12290 (sdhA)
00720 Other carbon fixation pathways
SMWW4_v1c12290 (sdhA)
Enzymes [BR:
smw01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SMWW4_v1c12290 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
FAD_binding_3
RBD_DGKtheta
Motif
Other DBs
NCBI-ProteinID:
AGE17033
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All DBs
Position
1362043..1363809
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AA seq
588 aa
AA seq
DB search
MKLPVREFDAVVIGAGGAGMRAALQISQAGSTCALLSKVFPTRSHTVSAQGGITVALGNS
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG
GQSLNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGT
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGMHLQ
ESLEEQGVSRDASDSDVEASLDRLNRWNNTRSGEDPVEIRKALQSCMQHNFSVFREGDAM
AKGLEELKVIRERLKNARLDDTSSEFNTQRIECLELDNLMETAYSTAVSANFRTESRGAH
SRFDYPERDDANWLCHSLYLPQSESMTRREVNMQPKLRPAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccagtcagagagtttgatgccgtcgtaatcggcgccggcggtgcgggcatg
cgtgccgcgctgcaaatttcccaagcgggctcgacctgtgccctgctgtccaaagttttc
ccgacccgttcccataccgtgtctgcacagggcggcatcaccgtcgcgctgggcaacagc
cacgaggacaactgggaatggcatatgtacgacacggtgaaaggttccgactatatcggt
gaccaggacgccatcgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatggggctgccgttctctcgtctggacgacggccgcatctatcagcgcccgttcggc
ggccagtcgctgaacttcggcggcgagcaggcggcgcgtaccgcagccgcagccgaccgt
accggccatgcgctgctgcacaccctgtatcaacagaacctgaaaaaccacaccaccatc
ttctccgagtggtatgcgcttgatctggtgaaaaaccaggacggcgcggtggtcggcacc
acggctatctgcatcgaaaccggtgaagtggtttacttcaaagccaaggccaccgtgctg
gcgaccggcggcgctggccgcatttaccagtccaccaccaacgcccacatcaacaccggc
gacggtgtcggcatggcgctgcgcgccggcgtgccggtgcaggacatggaaatgtggcag
ttccacccgaccggcatcgccggcgcgggcgtgctggtgaccgaaggctgccgcggcgaa
ggcggctacctgctgaacaagcacggcgagcgcttcatggagcgttatgcgccgaacgcc
aaagatctggcgggccgcgacgtggttgcccgttcgatcatgatcgaaatccgcgaaggc
cgcggctgcgacggtccttggggcccgcacgccaagctgaagctggatcacctgggcaaa
gaggtgctggaatcccgtctgccgggcattctggaactgtcccgcaccttcgcgcacgtc
gatccggtgaaagagccgatcccggttatcccaacctgtcactatatgatgggcggcatt
ccgaccaaggtgaccggccaggcgctgaccgtgaacgagaaaggtgaagacgtggtgatc
ccggggctgttcgccgtgggcgaaatcgcctgcgtatcggtgcacggcgccaaccgcctg
ggcggcaactcgctgctggatctggtggtgttcggccgttccgccggcatgcacctgcag
gaatcgctggaagagcagggcgtgagccgtgacgccagcgactccgacgtggaagcctcg
ctggatcgtctgaaccgttggaacaacacccgttccggcgaagacccggtcgaaattcgc
aaagcgctgcagtcttgcatgcagcacaacttctcggtattccgcgaaggcgatgcgatg
gccaagggcctggaagaactgaaagtgatccgtgaacgtttgaagaacgcacgcctggac
gatacctccagcgagttcaacacccagcgcatcgaatgcctggagttggataacctgatg
gagaccgcgtattccaccgccgtgtcggccaacttccgtaccgagagccgtggcgcgcac
agccgcttcgactatccggaacgcgatgacgccaactggctgtgccattcgctgtatctg
ccgcaatcggaaagcatgacgcgccgcgaagtgaacatgcaaccgaagctgcgcccggca
ttcccgccgaaagtgcgttcttactaa
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