Serratia marcescens WW4: SMWW4_v1c13910
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Entry
SMWW4_v1c13910 CDS
T02448
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00220
Arginine biosynthesis
smw00791
Atrazine degradation
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
SMWW4_v1c13910
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
SMWW4_v1c13910
Enzymes [BR:
smw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
SMWW4_v1c13910
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
ATP-grasp_5
RimK
NQRA_N
RnfC_N
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AGE17195
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All DBs
Position
1531710..1535336
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AA seq
1208 aa
AA seq
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MNMFTTVLIANRGEIACRAIRTLKRLGVTSVAVYSDADRNAPHVTEADRAVALGGDKAAD
SYLRIDKILAAAAATGAQAIYPGYGFLSESAEFADACEAAGIAFIGPTAAQMREFGLKHR
ARELAALAGVPMTPGTGLLESIEQAVAAAARIGYPVMLKSTAGGGGIGLTRCDDEAALRD
AYDSVKRLGEQFFRDAGAFIERFVDRARHVEVQIFGDGQGQVAALGERDCSLQRRNQKVV
EETPAPHLPAATRQALHRAAVALGESVNYRSAGTVEFIYDAARDEFYFLEVNTRLQVEHP
VTEMVTGLDLIACMLQVAAGDALDWAALRRAPQGAAIEVRLYAEDPLKNFQPSPGVLTEV
HFPDDVRLDGWVATGSEVSAFYDPMIAKLIVHGADRAQALEKLRVALAATRLHGIATNLD
YLRQVIATPQFQRGDVWTRLLDDLRFQPHCLEVLQPGTYSSVQDYPGRLGYWDIGVPPSG
PMDDFAFRLANRIVGNHPAAAGLEFTLQGPTLRFHCDATIALTGASCPADLDGEAVAYWR
PITVRAGQVLTLGRATHGCRTYLAVRNGFDVPVYLGSRSTFALGQFGGHAGRTLRVADML
AIAQPALAASTTPAPIAAPQAMDDSLIPHYGDQWHIGVLYGPHGAPDFFTAESIEAFFAT
DWQVHYNSNRLGVRLAGPKPEWAREDGGEAGLHPSNVHDCEYAIGAINFTGDFPVILTRD
GPSLGGFVCPVTIAKAELWKVGQVKPGDRIRFHPIGFRQAQSLEQAQLGSIEALAAVKAI
TLPPPDLAPAETVSAAVLAALPAAEGRPAVAYRQAGDGYILMEYGDNVLDLALRLRIHLL
MQSLREEAIPGVAELSPGVRSLQIRYDSRQISQADLLQRLLARERALGDVSRLKVPTRTV
WLPMAFEDSATLGAVDRYQQTVRASAPWLPNNVDFIQRINGLSRREQVRDILFDASYLIL
GLGDVYLGAPCAVPLDPRHRLLSSKYNPARTHTAEGTVGIGGMYMCIYGMDSPGGYQLVG
RTLPIWNKFLKNPQFTAGEPWLLRFFDQVRFYPVSEQELDEQREAFREGRMQVRIDESEF
DFAAYTRFLADNAGAIADFQHRQQQAFSAEVARWRSDDDEAEAQLLQPEEEDAIDGDLVS
ADLNGSVWKILVEPGQAVAAGQPLIVVEAMKMELAVTAPRAGIVKRISCRQGRPVGPGDA
LLWLEKAV
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtttactaccgtactgatcgctaaccgcggcgaaattgcctgccgcgccatt
cgcaccctgaaacgcctgggcgtcaccagcgtggcggtctattccgacgccgaccgcaat
gcgccgcacgtcaccgaggccgacagggcggtggcgctcggcggcgacaaggccgccgac
agttacctgcgcatcgacaagatcctcgcggccgcggcggccaccggcgcgcaggcgatc
taccccggatacggctttttgtccgagagcgccgagtttgccgacgcctgcgaggcggcg
ggcattgcctttatcggcccgacggcggcgcagatgcgcgagttcggcctcaagcaccgg
gcgcgcgagctggcggcgttggccggggtgccgatgacgccgggtaccggcttgctggag
agcattgagcaggcggtcgccgccgccgcgcgcatcggctacccggtgatgctgaaaagc
accgccggcggtggcggcatcggcctgacgcgctgtgacgacgaggcggcgctgcgcgac
gcctacgacagcgtcaaacggctgggggagcagttcttccgcgacgccggcgcctttatc
gaacgcttcgtcgatcgggcgcgccacgtcgaggtgcagattttcggcgatggccagggg
caggtggcggcgctcggcgagcgcgactgttcactgcagcgccgcaaccaaaaggtggtg
gaggaaaccccggcgccgcatctgccggcggcgacccgccaggcgctgcatcgggcggcg
gtggcgctgggcgagtcggtgaattaccgcagcgccggcacggtggagttcatttacgac
gccgcgcgcgacgagttttatttcctggaagtgaacacccgcttacaggtagagcacccg
gttaccgagatggtcaccggcctggatctgatcgcatgcatgctgcaggtggcggcgggt
gacgcgctggattgggcggcgttgcgccgcgcgccgcagggcgcggcgatcgaggtgcgc
ctctatgccgaagatccgctgaaaaacttccagcccagccccggcgtgctgaccgaggtg
catttccctgacgacgtgcgcctcgacggctgggtggcgaccggcagcgaagtttcggcg
ttttacgacccgatgatcgccaagctgatcgtgcacggcgccgatcgggcgcaggcgctg
gaaaaactgcgcgtggcgctggcggcgacccgtttgcacggcatcgccaccaacctcgac
tatctgcggcaggtgatcgccacgccgcaatttcagcgcggcgacgtctggacgcgcctg
ctggacgatttgcgtttccagccgcactgcctcgaagtgctgcaacccggcacctacagc
agcgtgcaggattatcccggccgcctcggctattgggacatcggcgtgccgccgtccggc
ccgatggacgacttcgcgtttcggctggccaaccgcatcgtcggcaaccacccggcggcg
gccgggctggagtttaccctgcaggggccgacgctgcgctttcactgcgacgccaccatc
gcgctgacgggcgccagctgcccggccgatctggacggcgaggcggttgcgtattggcgg
ccgattacggtgcgggccgggcaggtgctgacgctggggcgcgctacgcacggctgccgt
acctatctggcggtgcgtaacggcttcgacgtgccggtatatctcggcagccgctctacc
ttcgcgctcgggcagttcggcggccacgccgggcgcaccttgcgcgtggcggacatgctg
gcgatcgcccaaccggcgctggcggccagcaccacgccggcgccgatcgccgcgccgcag
gcgatggacgacagcctgatcccgcactacggcgatcaatggcacatcggcgtgctgtac
gggccgcacggcgcgccggactttttcaccgccgaatcgatagaggccttcttcgccacc
gactggcaggtgcattacaactccaaccgcctcggcgtgcgcctggcggggccgaagccc
gagtgggcgcgggaggacggcggcgaagccggtttgcacccttccaacgtgcacgactgc
gagtacgccatcggcgcgatcaacttcaccggcgacttcccggtgatcctgacccgcgat
gggccgagcctcggcggcttcgtctgcccggtgaccattgccaaggccgaactgtggaaa
gtggggcaggtgaagccgggcgaccgcatccgtttccatccgatcggcttccggcaggcg
cagtcgctggagcaggcgcagctcggcagcatcgaagcgctggcggcggtgaaggccatc
accctgccgccgccggatctggccccggcggagaccgtttccgccgcggtgctggcagcg
ctgccggcggcggaggggcgcccggcggtggcgtatcgccaggcgggggacggctacatc
ctgatggagtacggcgacaacgtgctcgatctggcgctgcgcctgcgcattcatctgctg
atgcagtcgctgcgtgaggaggcgataccgggcgtggcggagctgtctccgggcgtgcgt
tcgctgcagatccgctacgacagccggcagattagccaggccgacctgctgcagcgcctg
ctggcgcgcgaacgggcgctgggggacgtcagccgcctgaaggtgccgacgcgcaccgtc
tggctgccgatggcgtttgaggattcggccacgctgggggcggtggatcgctatcagcag
acggtgcgcgcctcggcgccctggctgccgaacaacgtcgatttcattcagcgcatcaac
ggcctgagccgacgcgagcaggtgcgcgacattctgttcgacgccagctacctgatcctc
gggctgggggacgtgtacctcggcgcgccctgcgcggtgccgctcgatccgcgccatcgc
ctgctgagctccaaatacaacccggcgcgcacccataccgccgaagggacggtcggcatc
ggcggcatgtacatgtgcatctacggcatggactcgccgggcggttaccagctggtgggg
cgcacgctgccgatctggaacaaattcctcaaaaacccgcagttcaccgccggtgagccc
tggctgctgcgctttttcgatcaggtgcgcttctacccggtcagcgagcaagagttggac
gagcagcgcgaagcgttccgcgaagggcgcatgcaggtgcgcatcgacgagagcgagttc
gacttcgccgcctacacccgtttcctggccgacaacgccggggcgatcgccgacttccag
catcgccagcagcaggcgttcagcgccgaagtggcgcgctggcgcagcgatgacgacgag
gccgaggcgcagctgttgcagccggaggaagaagacgccatcgacggcgatctggtcagc
gccgatctgaacggcagcgtgtggaagatcttggtggaaccggggcaggcggtggcggcc
gggcagccgctgatcgtggtcgaggcgatgaaaatggagctggcggtcaccgcgccgcgc
gccgggatcgttaagcgcatcagctgccggcaggggcggccggtcgggccgggcgacgcc
ctgctgtggctggaaaaggcggtctga
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