Serratia marcescens WW4: SMWW4_v1c14410
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Entry
SMWW4_v1c14410 CDS
T02448
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c14410
03036 Chromosome and associated proteins [BR:
smw03036
]
SMWW4_v1c14410
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SMWW4_v1c14410
Chromosome and associated proteins [BR:
smw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SMWW4_v1c14410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
HTH_20
HTH_5
HTH_10
DUF294_C
Fe_dep_repress
MarR_2
HTH_Crp_2
HTH_34
HTH_27
LexA_DNA_bind
DUF7343
TrmB
HTH_36
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AGE17245
LinkDB
All DBs
Position
complement(1579609..1580043)
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AA seq
144 aa
AA seq
DB search
MDDIDRQILTILADDARASLKTLSAQVGLSSPSTSERLRRLEESGVIQGYTLNVNLQAVG
YAFESLVRIKPLPGMLKKVEQLIQAIPEVVECDKVTGEDCFIVRLVAHSMEQLDHTLDRL
AEHAQSNTSIVKTTPVKRRLPPLL
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatcgatcgccaaatcctgaccattctggcggacgatgcgcgcgcatcgttg
aagacgctgagcgcgcaggtgggcctgtcgtcgccgagcacgtcggaaagactgcggcgg
ctggaggaaagcggcgtgatccagggctataccctgaacgtcaatctgcaggcggtgggc
tacgccttcgagtcgctggtgcgcatcaagccgctgccgggcatgctgaagaaggtcgag
cagctgattcaggcgatcccggaagtggtcgaatgcgataaggtgaccggcgaagactgc
tttatcgtgcggctggtggcgcactcgatggaacagctcgaccacaccctcgatcggttg
gccgagcatgcgcagagcaacacctcgatcgtgaaaaccacgccggtcaagcgccgcctg
ccgccgctgctctga
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