Serratia marcescens WW4: SMWW4_v1c14430
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Entry
SMWW4_v1c14430 CDS
T02448
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c14430 (prpR)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
Other families
SMWW4_v1c14430 (prpR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_30
AAA
Xre-like-HTH
AAA_3
HTH_psq
AAA_2
HTH_23
HTH_1
AAA_16
HTH_Tnp_ISL3
HTH_24
AAA_19
HTH_29
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AGE17247
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Position
complement(1581092..1582678)
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AA seq
528 aa
AA seq
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MSDHITPSRTPDKPVIWTVSITRLFDLFRDISLEFDHLATITPIRLGFEEAVQHIRDRLA
TEPCDAIIAAGSNGAYLKSRLSVPVILVKPGGFDLLQALSKARRTADRIGVITYKTPLPA
LLEFQQTFDLPLEQRSYVTEEDARGQIAELKAAGIQAVVGAGLISDLAEEAGLTAIFLYS
AATLRAAFSDALDVTRLMLGGAKRGGDYAARNTLQPRYGLSDLQGDSPQMEQTRRTIMLY
ARSPAAVLIEGETGTGKELAAQAIHREYFSRRGATPPFVAINCGAIAESLLEAELFGYEE
GAFTGSRRGGRRGLLETANGGTLFLDEIGEMPLHLQTRLLRALEEKTITRVGGQQPVAVD
FRVISATHNRLEQAIQHGDFRADLFYRLSALRLQLPPLRARGDDIAMLAEHFLKQSLAAL
DVPLTEPLRTALAGCYAALSHYAWPGNLRELRNMMERVALMLSTGVAPSGETLQWLLPEL
AVAPPPETPAAPVSAHEALARCGGDHAAAARLLGISRTTLWRRLKKPR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacatcacgccgtcccgcacgcctgacaaaccggtgatctggaccgtctcc
atcacccgcctgttcgatctgttccgggatatcagtctcgagttcgaccatctggcgacc
atcaccccgatccgtctcggcttcgaggaggcggtgcagcatattcgcgatcgcctggcg
accgagccttgcgacgccatcatcgccgccggctccaacggcgcctacctgaaaagccgc
ctgtcggtgccggtcattttggtcaagcccggcggcttcgacctgctgcaggcgctaagc
aaggcgcgcagaaccgccgatcgaatcggcgtcatcacctacaaaacgcccctgcccgcg
ctgctggagttccagcaaaccttcgatctgccgctggagcagcgcagctacgtcaccgaa
gaggacgcgcgcggccagatcgccgagctgaaagccgccggcattcaggccgtggtcggc
gccggcctcatcagcgatctggcggaagaggccgggctcaccgccatttttctctattcc
gccgccaccctgcgcgccgccttcagcgacgcgctggacgtgacgcgcctgatgctgggc
ggcgccaaacgtggcggtgactacgccgcgcgcaataccctgcagccgcgctatgggctg
agcgatttacagggcgattccccgcagatggagcagacgcggcgcaccatcatgctgtac
gcccgatcgccggcggcggtgttgatcgaaggcgaaaccggcaccggcaaagagctggcg
gcgcaggcgatccaccgcgaatacttttcccggcgcggcgcgacgccgccgttcgtcgcc
atcaactgcggcgccatcgccgaatcgctgctggaggcggaactgttcggctatgaggaa
ggcgccttcaccggctcacggcgcggcggccgacgcgggctgttggaaaccgccaacggc
ggcaccctgtttctggatgagatcggcgaaatgccgctgcacctgcaaacccggctgctg
cgggcgctggaagagaaaaccatcacgcgggtcggcgggcaacagccggtggcggtcgat
tttcgcgttatcagcgccacccacaatcgcctggagcaggcgattcaacacggcgatttt
cgcgccgatctgttctaccgtctgagcgccctgcggctgcagctgccgccgttgcgggcg
cgtggcgacgatattgcgatgctggcggaacactttctgaaacagtcgctggcggcgctc
gacgtgccgctgacggagccgctgcgcaccgccctggccggctgttacgccgcgctcagt
cattacgcctggcccggcaacctgcgcgagctgcgcaacatgatggagcgggtggcgctg
atgctgagcaccggcgtcgcgccgagcggcgagaccctgcagtggctgctgccggagctg
gcggtggcgccgccgcccgagacgccggcggcgcccgtctccgcccacgaagccctggcg
cggtgcggaggcgaccacgccgctgccgcccggttgctcgggatcagccgcaccacttta
tggcgccggctgaaaaaaccgcgctga
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