Serratia marcescens WW4: SMWW4_v1c14610
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Entry
SMWW4_v1c14610 CDS
T02448
Symbol
ybiO
Name
(GenBank) putative mechanosensitive channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smw02000
]
SMWW4_v1c14610 (ybiO)
Transporters [BR:
smw02000
]
Other transporters
Pores ion channels [TC:
1
]
SMWW4_v1c14610 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AGE17265
LinkDB
All DBs
Position
complement(1600294..1602510)
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AA seq
738 aa
AA seq
DB search
MPPNADSRRGSHLREHLLFLLLLLTLNVFAPPALAQNAPPAPADKSEQQKAAYAALAELL
QDDKARAELINHLKQTAGDAPAAAPATPEESTPATLSDSLNSLAQEGIGTFNQKLGALQK
LIDSGPKRVFNPAGFFRALGYFLLTVAVTFALFHLIRRLIAPLYKRMGSWGHNARLQRGP
WYKRPAAILGAFAIDLLVLLLALAAGNLFARHVHADSATILRLQTLFLSAFAVIEFFKAV
LRLIFAPRFDYLRPFPFSDRSAHYWNTRLAWLSGLIGYGLMVVVPVVAVQISYPAAATVN
LVVMLALTLYAIWLILHNRKPIQQQINLLAERSMAFFSVILRGLGHIWHLLAIAYFLVLF
VLSQFDIGNSLRFMMSATVKSLLVVGVGALLSGMLTRWIFRRISLPTDVNLRYPMLERRI
NSYIPNGLKILRVMVVLAVTLFLLDAWHLINLYQWAGSENGQRTLGGLVHILLILLIAVF
SWTLMASIIEHRLALELSNGVRPSARERTLLTLFRNVLAIVISTITVMIVLSQVGLNIAP
LLAGAGALGLAISFGAQTLVKDVITGVFIQFENGMNTGEYVTVSGITGTVERMTIRSIGL
RDDYGVYHIVPYSSITTLANYAREFGVYRANYTVSRDEDIDRVNEVLHQAVAALKQDEQV
KHFLIGEPVFNGVVALGDRSFTTRVTVRTQALKQWVVQYALDRLVKIHFDRAGIGMPQQA
MQISRAPQPHEEPPPAAS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaacgcagactcccgacgaggttctcatctgcgagaacacctgcttttcctg
ctgctgttgctgaccctgaacgtcttcgcaccaccggccctggcgcaaaatgcgccgccc
gcgcccgccgacaagagcgagcagcagaaagccgcctacgccgcgctggctgagctgctg
caagacgacaaagcgcgcgcggaactcatcaaccacctgaaacagaccgccggcgacgcc
cccgccgccgcgccggcaacgccggaggaatcgacgcccgctacgctgagcgacagcctg
aactcgctggcgcaggaaggcatcggcacctttaaccaaaagctcggcgcgctgcaaaag
ctgatcgactccggcccgaagcgcgttttcaatcccgccggctttttccgcgcgctgggc
tactttctgctgacggtggcggtcacctttgcgctgttccacctgatccggcggctgatc
gcgccgctgtacaaacgcatgggcagttggggacacaatgcgcggctacagcgcggcccg
tggtataaacgccccgccgccattctcggcgctttcgccatcgatctgctggtgctgctg
ctggcgctggcggcgggcaatctgttcgcccgccacgtccacgccgacagcgccaccatt
ctgcggctgcagaccctgtttctcagcgccttcgcggtgattgaatttttcaaggcggtg
ctgcggctgattttcgccccccgcttcgactatctgcgccccttccccttcagcgaccgg
agcgcgcactactggaacacgcgcctcgcctggctcagcggcctgatcggctacggcctg
atggtggtggtgccggtggtggcggtccagataagctacccggccgccgccaccgtcaac
ctggtggtgatgctggcgctgacgctgtacgccatttggctgatcctgcacaaccgcaag
ccgatacagcaacagatcaacctgctggccgagcggtcgatggcgtttttcagcgtgatc
ctgcgcgggctggggcatatctggcatctgttggcgatcgcctattttctggtgttgttc
gtgctgtcccagttcgacatcggcaacagcctgcgctttatgatgagcgccacggtgaaa
agcctgttggtggtcggcgtcggcgcgctgctgtccggcatgctgacccgctggattttc
cgccgcatttcactgccgaccgacgtcaatctgcgctacccgatgctcgagcggcgcatc
aactcctacatccccaacgggctgaagatactgcgggtgatggtggtgctggcggtgacg
ctgttcctgctcgatgcctggcacctgatcaacctgtaccagtgggcgggcagcgaaaat
ggccagcggacgctcggcgggctggtgcatatcctgctgatcctgttgattgccgtattc
agctggacgctgatggccagcatcatcgagcaccgtctggcgctggagctgagcaacggc
gtacggccgagcgcgcgcgaacgcacgctgctgacgctgtttcgcaacgtgctggctatc
gttatcagcaccattaccgtgatgatcgtgctgtcgcaggtgggattgaacatcgcgccg
ctgctggcgggcgccggcgcgctggggctggccatcagcttcggcgcccaaacgctggtg
aaagacgtgattaccggcgtgttcatccagttcgaaaacggcatgaacaccggcgagtac
gtcaccgtcagcggcatcaccggcaccgtggagcgcatgaccatccgctcgatcggcctg
cgcgacgactacggcgtctaccacatcgtgccgtactcctcgatcaccacgctggccaac
tatgcgcgtgagttcggggtataccgcgccaactacaccgtcagccgcgacgaggacatc
gatcgggtcaatgaggtgctgcatcaggccgtcgcggcgctgaagcaagatgaacaggtg
aagcatttcctgattggcgagccggtcttcaacggcgtggtggcgctgggagaccgctcg
ttcaccacccgcgtgacggtgcgcacacaggcgctgaaacagtgggtggtgcaatacgcc
ctcgatcggctggtgaaaatccatttcgatcgggccggcatcggcatgccgcagcaggcg
atgcagatctcccgcgcgccgcagccgcatgaagagccgccgcctgccgcgagctga
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