Serratia marcescens WW4: SMWW4_v1c16970
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Entry
SMWW4_v1c16970 CDS
T02448
Symbol
ydcJ
Name
(GenBank) putative metalloenzyme
KO
K25986
2-oxoadipate dioxygenase/decarboxylase [EC:
1.13.11.93
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00310
Lysine degradation
smw01100
Metabolic pathways
smw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SMWW4_v1c16970 (ydcJ)
Enzymes [BR:
smw01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.93 2-oxoadipate dioxygenase/decarboxylase
SMWW4_v1c16970 (ydcJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HGLS
Motif
Other DBs
NCBI-ProteinID:
AGE17501
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All DBs
Position
complement(1871876..1873282)
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AA seq
468 aa
AA seq
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MTAQQFVSPNEIRARFSHAMSDMYQKEVPLYGDLLELVAETNRQVLREDAALAHQLQITG
EIERLAMERHGAIRVGTADELATLRRLFRVMGMAPVGYYDLSVAGVPVHSTAFRAIHEDA
LQISPFRVFTSLLRLELIEDPALRALAERLLARRRIFTDRALELMALQEAQGGLNEVQAQ
EFVEQALETFRWHNQATVSAEEYRQLHDQHRLIADVVAFKGPHINHLTPRTLDIDRVQQA
MPGRGITPKAVIEGPPRRRRAILLRQTSFKALEESVDFVEHDGHAIAGHHTARFGEIEQR
GVALTPKGRELYDRLLQATNDALQAPPSEKNAERYYQLLEENFRAFPDDYATLREQQLAW
FRYFPTECGLAAKESLDKHSTLEQLIEKEHVRFQPLVYEDFLPVSAAGIFQSNLGDSRHA
QYNAVSSRAAFEQALGSEVIDELALYQQTQQRSLEACAQALGLATLAS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccagcagttcgtttcacctaatgaaatccgcgccagattctctcacgcgatg
tcggacatgtatcaaaaagaggtaccgctgtacggcgatctgctggagctggtggcggaa
accaaccggcaggttctacgcgaagatgccgcactggctcatcaactgcaaatcaccggc
gagatcgaacgcctggccatggagcgccacggcgcgatccgggtcggcacggcggacgaa
ctggccaccctgcgccgcctgttccgggtgatgggcatggcgccggtcggttactatgac
ctgtcggtggcgggcgttccggtgcactccaccgcttttcgcgccatacacgaagacgcg
ctgcagatcagtcctttccgcgtgttcacctccctgctgcgcctggaactgatagaagat
cccgcgctgcgtgcgctggccgagcgcttgctggcgcgccgccgtatctttaccgatcgc
gcgctggagctgatggcgctgcaggaagcgcaaggcgggctgaatgaagtgcaggcgcaa
gaatttgtcgaacaagcgctggaaaccttccgctggcataaccaggcgacggtcagcgcc
gaagaataccggcagttgcacgatcagcatcgcctgatcgccgacgtggtggcgtttaaa
gggccgcatatcaaccacctgacaccacgtacgctggatatcgatcgcgttcagcaagcg
atgcccggccgcggtattacgcccaaagcggtcatcgagggcccgccgcgccgccgccgc
gcgatcctgctgcgccaaaccagcttcaaagcgttggaagaaagcgtcgatttcgttgag
cacgacggccacgccatcgccggtcaccataccgcgcgcttcggcgagatcgaacaacgc
ggcgtggcgctaacgcctaaaggacgcgaactttacgaccgtttgctgcaggcgaccaac
gatgcgttgcaggcgccgccgagcgagaagaatgccgagcgctactatcaactgctggag
gaaaacttccgggcgtttccggatgattacgccacgctgcgtgagcaacagctagcctgg
ttccgctatttcccgaccgaatgcggcctggcggccaaagagtcgctggacaagcacagc
accctggaacagctgatcgagaaagaacacgttcgcttccagcctctggtgtatgaagat
tttctgccggtcagcgcggcggggattttccagtcgaatctgggggacagccgccacgcg
cagtacaacgcggtttccagccgggcagcgtttgaacaagcgttgggcagtgaggtgatc
gacgagctggcgctgtatcagcaaacccagcagcgttcgctggaagcctgcgcgcaagcc
ctggggcttgccacgctggcatcctga
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