Serratia marcescens WW4: SMWW4_v1c17020
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Entry
SMWW4_v1c17020 CDS
T02448
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00541
Biosynthesis of various nucleotide sugars
smw01100
Metabolic pathways
smw01250
Biosynthesis of nucleotide sugars
Module
smw_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SMWW4_v1c17020 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smw01005
]
SMWW4_v1c17020 (kdsB)
Enzymes [BR:
smw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SMWW4_v1c17020 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
smw01005
]
Lipid A
SMWW4_v1c17020 (kdsB)
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Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DacZ_P
DUF2064
Motif
Other DBs
NCBI-ProteinID:
AGE17506
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Position
1876278..1877027
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AA seq
249 aa
AA seq
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MSFIAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHPEVAKAVEA
AGGEVCMTSPDHHSGTERLAEVIAHYGFADDQIIVNVQGDEPLIPPVIVRQVAENLAGSQ
AGMATLAVPIESAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERFAASKESIGDSLLR
HIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL
QRVRDSIQP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcgctattattcccgcccgctatgcctcaacccgtttgccgggcaaaccg
ctggccgatattcacggcaagccgatggtggtgcatgtgatggagcgcgcccgtgagtcc
ggcgctagccgcgtcatcgtggcgaccgatcatcctgaagtcgccaaagcggtggaagcc
gccggcggcgaagtgtgcatgaccagcccggatcaccattccggcaccgagcgtctggcg
gaagtgatcgcgcactacggctttgccgacgaccagatcatcgttaacgtgcagggcgat
gagccgctgatcccacccgttatcgtgcggcaggtggcggaaaacctggcgggcagccag
gccggcatggcgacgttggcggtgccgatcgagagcgccgaagaggctttcaaccccaat
gcggtgaaggtggtgatggacgcgcagggctacgcgctctatttctcacgcgccaccatt
ccgtgggatcgcgagcgtttcgccgcgtcgaaagagagcatcggcgacagcctgctgcgt
catatcggcatctacgcataccgcgcgggcttcgtgcgccgctacgtcagctgggcgccg
agccaactggagcagatcgagctgttggaacagctgcgcgtgctgtggtacggtgaaaag
atccacgtggcggtcgcgaaagcgatcccgagcgtgggggtcgatacgccggaagacctc
cagcgcgtgcgcgacagcattcaaccctga
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