Serratia marcescens WW4: SMWW4_v1c17090
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Entry
SMWW4_v1c17090 CDS
T02448
Symbol
ycbB
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smw01002
]
SMWW4_v1c17090 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
SMWW4_v1c17090 (ycbB)
Peptidases and inhibitors [BR:
smw01002
]
Cysteine peptidases
Family C82
SMWW4_v1c17090 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SMWW4_v1c17090 (ycbB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGE17513
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All DBs
Position
1886488..1888296
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AA seq
602 aa
AA seq
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MLLKKGNSLRRLALSGAIACSLVSSFSALATVTALPVATAGMSVAQSRSELLAALPRGMD
LHYLSTLAPLYAANHMQPMWQDREAVQQFQQQLAELAMSGVQPQFTQWVKMLTDPALSEA
GRDAVLSDAMLGYLQFVSAIGANGNNWLYSNIPYKLGLPPTAVINQWQLAVRQARTLSYV
NSLAPQHPQYAKMHQALRDMLADNRPWPQVGRGPSLRPGQMSNDIPALREILTRTGMLAA
SAPEAEPEPAVVSAKSNEPDDGGLTVDEEKSRVTVSPSAAPVTELTAEQTPPQIGSVVSD
NLYTNELVEGVKRFQKWQGLTADGVIGVRTREWLNVSPKTRAALLALNIQRLRILPGHVG
TGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTTLVRE
DIVPKAMRDGNYFQKHGYTVLSGWSNDAEVINPAMIDWSMVSARNFPYRVRQAPGATNSL
GRFKFNMPSSDAIYLHDTPNHSLFQKDIRALSSGCVRVNKASDLANMLLQDAGWNNSRVS
STLKEGNTTYVNIRQRIPVKLYYLTAWVSDDGQPQFRTDIYNYDNTVRSGAQILAQAKKL
MQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaaaagggaaactctctacgacgtttggcgctgagtggcgctatcgcctgt
agtcttgtgtcgtcgttttccgccttggccaccgtaacggcgttaccggtggcaacagca
ggcatgtccgttgcgcagagtcgttctgaactgctggccgcgttgccgcgcggtatggat
ctgcactacctttccacgctggcgccgctgtatgcggcgaatcatatgcagccgatgtgg
caggatcgcgaggccgttcagcaatttcaacagcagctggccgaactggcgatgtccggc
gtacagccgcagttcacccagtgggtgaagatgttgaccgatccggcgctcagtgaagcg
ggccgcgatgcggtgttgtccgatgcgatgctgggctatttgcagtttgtatccgccatc
ggcgccaacggcaacaactggctgtacagcaatattccttacaagcttggtttgccgccc
acggcggtgatcaatcaatggcagctggcggtgcgccaggcgcgaaccctgagctacgtg
aattcgcttgcgccgcagcatccgcaatacgccaagatgcatcaggcgctgcgtgacatg
ctggcggacaaccgcccctggccgcaggtgggcaggggcccgagcttgcgcccaggccaa
atgagcaacgatatcccggcgctgcgtgagatcctgacgcgcaccggcatgctggccgcc
tcggcgccggaagcggagccggaaccggcggtggtctcggcgaagagcaatgaacccgac
gacggcgggctgacggtagacgaagagaaaagccgcgtgacggtcagcccatcggcggcg
ccggtgacggagttgaccgcggaacagacgccgccgcagatcggcagcgtggtgagcgac
aacctctataccaacgagctggtggagggcgtcaagcgtttccagaaatggcaggggttg
acggcggacggcgtgatcggcgtgcgcacccgcgagtggctcaacgtgtcaccgaaaacc
cgcgccgcgctgttggcgctgaatatccagcgcttgcgcatcttgccggggcatgtcggc
accggcattatggtgaacattcccaactactcgctgacctactatcagaacggcaacgaa
gtgttgtcctcccgcgttatcgtcgggcggccaagccgcaagacgccgttgatgagcagc
gcattgaataacgtggtggtcaacccgccttggaacgtgccgaccacgctggtgcgtgag
gatatcgtgccgaaggcgatgcgcgacggtaactatttccagaaacacggctataccgtg
ctgtcaggctggagcaacgatgcggaagtgatcaacccggcgatgatcgactggagcatg
gtttctgcgcgcaacttcccgtatcgcgtgcgccaggcgccgggcgccaccaactcgctg
gggcgtttcaagttcaatatgccgagctcggatgccatctacctgcacgataccccgaac
cacagcctgttccagaaagacatccgcgcgctcagctccggctgcgtgcgggtgaacaag
gcttccgatttggcgaatatgctgctgcaggatgccggctggaacaatagccgcgtttcc
tccacgctgaaagaaggcaataccacttatgtgaatattcgccagcgtattcccgtaaaa
ctgtattatctgaccgcctgggtttcggatgatggccaaccgcaattccgtacagatatt
tacaattatgataatacggtgagatcgggcgcacaaattttggctcaggccaaaaaatta
atgcagtaa
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