Serratia marcescens WW4: SMWW4_v1c20570
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Entry
SMWW4_v1c20570 CDS
T02448
Symbol
icd
Name
(GenBank) NADP+ specific isocitrate dehydrogenase, e14 prophage
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00020
Citrate cycle (TCA cycle)
smw00480
Glutathione metabolism
smw00720
Other carbon fixation pathways
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
smw01200
Carbon metabolism
smw01210
2-Oxocarboxylic acid metabolism
smw01230
Biosynthesis of amino acids
smw04146
Peroxisome
Module
smw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smw_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SMWW4_v1c20570 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SMWW4_v1c20570 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SMWW4_v1c20570 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SMWW4_v1c20570 (icd)
Enzymes [BR:
smw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SMWW4_v1c20570 (icd)
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Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
AGE17858
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Position
2234930..2236183
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AA seq
417 aa
AA seq
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MESKVVVPAEGKKITVDAQGKLVVPHNPIIPFIEGDGIGVDVTPAMIHVVDAAVKKAYHG
ERKISWMEIYTGEKSTHVYGKDVWLPDETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALR
QQLDLYVCLRPVRYYQGTPSPVKQPELTDMVIFRENAEDIYAGIEWKAGSAEADKVIKFL
RDEMGVKKIRFPEQCGIGVKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEG
AFKDWGYELAREEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVI
ACMNLNGDYISDALAAQVGGIGIAPGANIGSDCALFEATHGTAPKYAGQDKVNPGSIILS
AEMMLRHMGWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIVKHM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaagtagttgttccggcagaaggtaaaaaaatcacggttgacgcccagggt
aaactggttgttcctcataacccgatcattccgttcatcgaaggcgacggcatcggcgtt
gacgtgactcctgccatgatccacgtggttgatgcggccgttaaaaaggcttaccacggc
gaacgtaaaatctcctggatggaaatctacaccggcgaaaaatctacccacgtttacggt
aaagacgtgtggctgccggacgaaactctggacctgatccgcgactaccgcgtcgccatc
aaaggccctctgaccaccccggtcggcggcggcatccgttctctgaacgtggccctgcgc
cagcagctggacctgtacgtgtgcctgcgcccggtgcgttactaccagggcaccccaagc
ccggtcaaacagcctgagctgaccgacatggtgatcttccgcgaaaacgccgaagacatc
tacgctggcatcgagtggaaagccggctccgccgaagcggacaaagtgatcaaattcctg
cgcgacgaaatgggcgtgaagaaaatccgcttcccggagcagtgcggtatcggtgtgaag
ccatgctccgaagaagggaccaagcgtctggtgcgtgcggcgatcgaatacgccatcacc
aacgaccgtgactccgtgaccctggttcacaaaggcaacatcatgaagttcaccgaaggt
gccttcaaggattggggctatgagctggcgcgcgaagagttcggcggcgagctgatcgac
ggcggcccatggctgaagatcaagaacccgaacaccggcaaagagatcgtggttaaagac
gtgatcgccgacgccttcctgcagcagatcctgctgcgcccggcggaatacgacgtgatc
gcctgtatgaacctgaacggcgactacatctccgacgccctggcggcccaggtaggcggc
atcggtattgcgccgggcgccaacatcggctccgactgcgccctgttcgaagcgactcac
ggcaccgcgccgaagtacgccggccaggacaaagtgaacccaggctccatcatcctgtct
gcagagatgatgttgcgccacatgggctggttcgaagcggctgacctgatcgttaaaggc
atggaaggcgccatcgccgccaagaccgtgacctatgacttcgaacgcctgatggaaggc
gctaaattgctgaaatgttcagagtttggcgacgctatcgttaaacacatgtaa
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