Serratia marcescens WW4: SMWW4_v1c22050
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Entry
SMWW4_v1c22050 CDS
T02448
Symbol
ydiJ
Name
(GenBank) putative FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
smw
Serratia marcescens WW4
Pathway
smw00310
Lysine degradation
smw01100
Metabolic pathways
smw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SMWW4_v1c22050 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_17
Fer4_18
Fer4_10
BBS7_pf
Motif
Other DBs
NCBI-ProteinID:
AGE18006
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All DBs
Position
2385364..2388420
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AA seq
1018 aa
AA seq
DB search
MIPQISQAPGLVQRVLDFLEALKQNGFNGDTATSYADRLTMATDNSIYQLLPDAVVFPRS
TADVALIARLAGEERFNTLTFSPRGGGTGTNGQSLNTGIVVDMSRHMNRILEINVEQGWV
KVEAGVIKDQLNQYLRPFGYFFSPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL
RAVLLGGEMIDTRAMPTALAETIALEETAEGRIYRTVLNRCREQRALILEKFPKLNRFLT
GYDLRHVLSDDLQTFDLTRILTGAEGTLAFITEARLDITPLPKVRRLVNVKYDSFDSALR
NAPFMVEAKALSVETIDSKVLNLAREDIVWHSVNELIADVPDKEMLGLNIVEFAGDDRAL
IDGQMEALCQRLDELIAQRQGGVIGYQICGDLAGIERIYNMRKKAVGLLGNAKGRAKPIP
FAEDTCVPPQHLADYIVEFRQLLDDHNLSYGMFGHVDAGVLHVRPALDMCDPQQEVLMKQ
ISDRVVALTAKYGGLLWGEHGKGFRAEYSPEFFGETLYEELRRIKAAFDPDNRLNPGKIC
SPLAVDAPMMQVDAVKRGTFDRQIPVEVRTSFRGALECNGNGLCFNFDVRSPMCPSMKIS
GNRIHSPKGRATLVREWLRLLAEQGVDPLALEKQLPQQRLSLRGLIEKTRNSWHAGKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYLRPVSDYMVAGVESYT
PLMARAPKVFNFFFRQPWLREMSRNAIGMVDLPLLSSPTLRQQLSGHRATTLTLEQLEGL
SAEQRAEHVLIVQDPFTSYYDAKVVADFVRLVEKLGYKPVLLPFSPNGKAQHVKGFLTRF
ARTARKTADFLNRVAQLGMPLVGVDPALVLCYRDEYREILGAERGDFQVQLVHEWLQQRI
ADRAEQPATGEPWYLFGHCTETTALPASGQQWAAIFARFGAKLESVSVGCCGMAGTYGHE
ARNLQNSLGIYELSWHPTLQRLPRQRCLATGYSCRSQVKRIEGNGVRHPLQALLEMIE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacagatttctcaggcgcccggcctggttcaacgggtgctcgactttttggaa
gcactgaagcaaaacggattcaacggcgataccgccaccagctatgccgaccggctgacg
atggccaccgacaacagtatctatcagctgctgcccgatgcggtggtgttcccccgttcc
accgccgacgtggcgctgatcgcccgtctggccggagaagagcgcttcaatacgctgacc
ttcagcccgcgcggcggcggcaccggcaccaacggccagtcgctcaataccggcatcgtg
gtcgatatgtcgcgccatatgaaccgcattctggagatcaacgtcgaacagggctgggtg
aaagtcgaagccggggtgatcaaggaccagttgaatcaatacctgcgaccgttcggctac
ttcttctcgccggaactgtccaccagcaaccgcgccacgctggggggaatgatcaacacc
gatgcctccggccagggctcgctggtgtacggcaaaacctccgatcacgtgttggggctg
cgggcggtgctgctgggcggcgagatgatcgatacccgcgccatgccgacggcgctggcg
gaaacgattgctctggaagagaccgccgaagggcgcatctaccgcacggtgctcaaccgc
tgccgcgaacagcgcgcgctgatcctggagaaattccccaagctcaaccgcttcctcacc
ggttacgatctgcgccacgtgctgagcgacgatctgcaaaccttcgatttgacgcgtatt
ctgaccggcgccgagggcacgctggcgtttatcaccgaggcgcggctggacatcacgccg
ctgccgaaagtgcgccgcctggtcaacgtgaagtacgattccttcgactcggcgctgcgc
aatgcgccctttatggtcgaggccaaggcgctgtcggtggaaaccatcgattccaaggtg
ctgaacctggcgcgtgaagacatcgtttggcactcggtgaacgaactgatcgccgacgtg
ccggataaagagatgctcgggctgaacatcgtcgagttcgccggcgacgatcgggcgctg
atcgacggccagatggaggccctgtgccaacggctggacgaattgatcgcgcagcggcag
ggcggcgtgatcgggtaccagatctgcggcgatctggcgggcatcgagcgcatttacaac
atgcgcaagaaggcggtcgggctgctgggcaacgccaaagggcgcgccaagccgattccg
ttcgccgaggacacctgtgtgccgccgcaacatctggcggactatatcgtcgaatttcgg
caactgctcgatgaccacaatctgagctatggcatgtttggccacgtcgacgccggggtg
ctgcacgtgcgcccggcgctcgacatgtgtgacccgcagcaggaagtgctgatgaagcag
atctccgatcgggtggtggcgctgaccgccaaatacggcggcctgctgtggggggagcac
ggcaaggggttccgcgcggaatacagccctgaattcttcggggaaacgctgtatgaagag
ctgcgccgcatcaaggcggcgttcgatccggataaccgcctgaacccaggcaagatctgt
tcgccgctggcggtggatgcgccgatgatgcaggtggatgcggtcaaacgcggcaccttc
gatcgccagatcccggtcgaggtgcgcacctcgttccgcggcgcgctggagtgtaacggc
aacggcctgtgcttcaacttcgacgtgcgcagcccgatgtgcccgtcgatgaagatcagc
ggcaaccgcattcattcgccgaaagggcgggcgacgctggtgcgcgagtggctgcgtctg
ttggccgagcagggggtcgatccgctggcgctggagaaacagctgccgcagcagcgcctc
agcttgcgcggcctgatcgagaaaacccgcaacagctggcacgccggcaagggtgagtat
gacttctcgcacgaagtgaaagaggcgatgtccggctgcctggcctgtaaggcctgttca
acccagtgtcccatcaagattgacgtgccgggattccgttcgcgcttcctgcagctttac
cacactcgctatctgcgcccggtaagcgactacatggtcgccggcgtggagagctatacc
ccgttgatggcccgcgcgccgaaggtgttcaacttctttttccgccagccgtggctgcgg
gagatgagccgcaacgccatcggcatggtcgatctgccgctgttgtccagcccgacgctg
cgccagcagctgtccggccaccgcgcgaccacgctgacgctggagcagttggaagggctg
agcgccgagcagcgcgcagaacacgtgttgatcgtccaggatccgttcaccagctattac
gacgccaaagtggtggcggactttgttcggctggtggagaagcttggctataaaccggtg
ctgctgccgttctcaccgaacggcaaggcgcagcatgtgaagggcttcctgacgcggttc
gcccgcaccgcgcgcaaaaccgccgatttcctcaaccgtgtggcgcagctaggcatgccg
ctggtgggcgtcgatccggcgctggtgctgtgctaccgcgacgaataccgcgagatcctc
ggcgccgagcgcggcgatttccaggtgcagctggtgcatgaatggctgcagcagcggatc
gcggatcgtgccgaacagccggcgaccggcgagccgtggtatctgttcggccactgcacc
gaaaccaccgcgttgccggccagcggccaacagtgggcggcgatcttcgcccgcttcggc
gccaaactggagagcgtcagcgtcggttgctgcggcatggcgggcacttacggccatgaa
gccaggaacctgcaaaactcgctcggcatttatgagctatcatggcatccgacgctacag
cgtttgccgcggcagcgctgcctggcgaccggctattcctgccgcagccaggtgaaacgc
atcgagggcaatggcgtgcgccacccattacaggcacttctggagatgattgagtga
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