Serratia marcescens WW4: SMWW4_v1c22140
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Entry
SMWW4_v1c22140 CDS
T02448
Symbol
ycfS
Name
(GenBank) L,D-transpeptidase linking Lpp to murein
KO
K19236
L,D-transpeptidase YcfS
Organism
smw
Serratia marcescens WW4
Pathway
smw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SMWW4_v1c22140 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smw01002
]
SMWW4_v1c22140 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
SMWW4_v1c22140 (ycfS)
Peptidases and inhibitors [BR:
smw01002
]
Cysteine peptidases
Family C82
SMWW4_v1c22140 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SMWW4_v1c22140 (ycfS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
RelB_leu_zip
LysM
Motif
Other DBs
NCBI-ProteinID:
AGE18015
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Position
2395716..2396729
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AA seq
337 aa
AA seq
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MKRALSLMGMVFATVLAGTQAASATEYPLPPPDSRLIGENTTYTVPNDGRPLEAIAADYK
IGLLGMLEANPGTDPFLPKPGTVLTIPTQMLLPDTKREGIIVNLAELRLYYYPKGENKVI
VYPIGIGQTGMHTPLEVTSISQKIPNPTWTPTANIRKRYQSQGVTLPAVVPAGPENPMGL
FALRLAMGRGEYLIHGTNANFGIGMRVSSGCIRLRPTDIEALFNMVPRGTRVQVINDPVK
ISVEPDGKRYVEVHQPLSRVESDDPQTMPIALSKAEKAFAADGQTDRAVFDSAVVRRSGM
PVLVNVGESPSAVSLTPAAAPAANKSPFKAAPISSVN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcgttgagtttaatgggcatggtcttcgccaccgtattggccggcacgcag
gccgccagtgcgaccgagtacccgctgccgccgccggacagccgtctgatcggcgaaaac
accacttataccgtgccaaacgacggccgcccgctggaagccatcgccgctgactacaag
atcggcctgctgggcatgctggaagccaaccccggcacggatccgttcctgcccaagccg
ggtacggtgctgaccattccgacccaaatgctgctgcctgacaccaagcgtgaagggatc
atcgtcaacctggccgagctgcgcctttattactacccgaaaggcgagaacaaagtgatc
gtctatccgatcggcatcggccagaccgggatgcacacgccgctggaggtgacctccatc
agccagaagatccctaacccgacctggacgcccaccgccaacatccgcaagcgctatcaa
tcccagggcgtgacgctgcctgcggtggtgccggccggccctgagaacccgatggggctg
ttcgccctgcgtctggcgatggggcgcggtgaatacctgatccacggcaccaacgccaac
ttcggtatcggcatgcgcgtcagctccggctgcattcgcctgcgtccgacggatatcgag
gcgctgttcaacatggtgccgcgcggtacgcgggtgcaagtgatcaacgatccggtgaag
atttccgttgagccggacggcaaacgctatgtggaagtgcaccaaccgctgtcgcgggtg
gaaagcgacgatccgcagaccatgccgatcgcgttgtctaaagcggagaaagcctttgcg
gccgatggtcagaccgatcgcgccgtattcgatagcgcggttgtacgccgttctggcatg
ccggtgctggtcaacgtaggggagagtccgtctgcggtgagtttgacacctgcagcggct
cctgcggcgaataagagcccattcaaggcagcgccaatcagttcggtgaactaa
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