Serratia marcescens WW4: SMWW4_v1c22610
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Entry
SMWW4_v1c22610 CDS
T02448
Symbol
ydcN
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K23779
XRE family transcriptional regulator, regulator of sulfur utilization
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c22610 (ydcN)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
XRE family
SMWW4_v1c22610 (ydcN)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_3
Cupin_2
HTH_31
HTH_25
HTH_26
HTH_19
AraC_binding
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
AGE18062
LinkDB
All DBs
Position
2438219..2438782
Genome browser
AA seq
187 aa
AA seq
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MQELAGHLAHTLRTLRAQRGWSLTQAAEYTGVSKAMLGQIERGESSPTVATLWKIATGFN
VAFSAFLEASPAQQQATLHRYGDLPVYDQDNADMRVVPLFPYDRQLGFDMFVIDLAPGAL
SESSPHEPGVIEHVIVISGRLELAIDGAWHSLAAGEAMRFQADRPHAYRNAGSQTVRIHD
LIHYPQS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacttgccggccatttggcgcacacccttcgcacgctgcgcgcacagcgcggc
tggagcctgacgcaggcggcggaatacaccggcgtcagcaaggcgatgctcgggcagatt
gaacgcggcgagtccagcccgacggtggcgacgctgtggaagatcgccaccggtttcaac
gtggcgttttccgcctttcttgaggcctcacccgcccagcagcaggcgacgttgcaccgc
tatggcgatctgccggtatacgatcaggacaacgccgacatgcgcgtggtgccgctgttt
ccctacgatcgccagctgggtttcgatatgttcgtcatcgatctcgcgccgggtgcgctc
agcgaatcgtcgccgcatgagccgggcgtgatcgagcatgtgatcgtgatcagcggccga
ttagaattggcgatagacggcgcttggcacagcctggcggccggcgaggcgatgcgcttt
caggccgatcggccgcatgcttaccgcaacgccggttcgcaaacggtgcgcatccacgat
ctgatccactatcctcaatcctga
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