Serratia marcescens WW4: SMWW4_v1c27310
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Entry
SMWW4_v1c27310 CDS
T02448
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smw03032
]
SMWW4_v1c27310 (topB)
Enzymes [BR:
smw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SMWW4_v1c27310 (topB)
DNA replication proteins [BR:
smw03032
]
Prokaryotic type
DNA Topoisomerases
SMWW4_v1c27310 (topB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGE18526
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All DBs
Position
complement(2964183..2966108)
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AA seq
641 aa
AA seq
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MRLFIAEKPSLARAIADVLPKPHRRGDGYIACGNNDVVTWCVGHLLEQAQPDAYDSRYAR
WSLADLPIIPEKWRLQPRPSVSKQLNAIKKLLLEADEVVHAGDPDREGQLLVDEVLDYLD
LTAEKRQNVRRCLINDLNPQAVERAVERLRDNRDFIPLCVSALARSRADWLYGINMTRAY
TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVPKDFFEVKAHIVTPKEERFVALW
QPSESCEPYQDEEGRLLHRPLAEHVVKRIEGQPALVTSYNDKRESDTAPLPFSLSTLQIE
AARRYNLSAQQVLDVCQRLYETHKLITYPRSDCRYLPEEHFAGRHAVLNAISVHQPELYP
QPVIDSDRRNRCWDDKKVDAHHAIIPTARAGKINLTQDERNVYGLVARQYLMQFCPDAVF
RKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDEENEGAPLPVVAKDDELLCECGEV
VERQTQPPRPFTDASLLSAMTGIARFVQDKALKKILRATDGLGTEATRAGIIELLFKRAF
LYKKGRYIHSSETGRTLIHSLPDLAARPDMTANWEATLTQISEKSCRYQDFMQPLVGTLQ
ELIYQAKQSRASMAFRGLPPPPSSGGKKRRKSAGKAQEKSE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcatagccgagaaaccgagtttggcgcgcgccattgccgacgtattgccc
aagccgcatcgccgcggcgacgggtatatcgcctgcggcaacaatgatgtggtgacctgg
tgcgtcggccacctgctggagcaggctcagcctgacgcctatgacagccgctatgcgcgc
tggtcgttggcagacctgccgataattcccgaaaaatggcggttgcagccgcggccttcg
gtcagcaaacagctcaacgccattaaaaagttgctgctcgaagccgatgaagtggttcac
gccggcgacccggatcgcgaagggcagctgctggtggatgaggtgctggactacctggat
ttgacggcggaaaagcgccagaacgtgcgccgctgtctgatcaacgacctcaacccgcag
gcggtggagcgcgcggttgaacgcctgcgcgacaaccgtgacttcatcccattgtgcgtg
tccgcccttgcgcgctcacgcgccgactggctgtacggcatcaatatgacccgcgcttat
acgctgctgggccgcaacgccggttatgacggcgtgttgtcggtgggcagggtgcagacg
ccggtgctggggttggtggtgcggcgcgatgaagagatcgaaaacttcgtgccgaaagac
ttctttgaggtcaaggcgcacatcgttacgccgaaagaagagcgtttcgtggcgctgtgg
cagcccagcgagtcgtgcgagccttatcaggacgaagaggggcgtttgctgcaccggccg
ttggcggagcacgtggtcaagcgcatcgagggccagccggcgctggtcacgtcctataac
gataaacgggaatcagataccgcgccgctgccgttttcgctctccacgctgcaaatcgaa
gcggcccggcgttataacctcagcgcgcaacaggtgctggacgtttgccagcggctgtac
gaaacccacaagttgattacctatccgcgttccgactgtcgctacctgccggaagagcat
ttcgccggccgccacgcggtgctgaacgccatcagcgtgcaccagcccgagctgtacccg
cagccggtgatcgacagcgatcgccgcaaccgttgctgggacgataaaaaggtcgacgcg
caccacgccatcattcccaccgcccgcgccggcaagattaatctgacgcaggatgagcgg
aacgtgtatgggctggtggcgcgccagtatctgatgcagttctgtccggatgcggtattc
cgcaaatgcgtgatcgagctggatatcgccggcggcaaatttatcgccaaggcgcgattc
ctggcggaagccggctggcgtacgctgctgggcagcaaggagcgcgacgaggagaacgaa
ggtgcgccgctgccggtggtggctaaagatgatgagctgttgtgcgagtgcggtgaagtg
gtggagcgccagacgcagccgccgcggccgtttactgacgccagcctgttgtcggccatg
accggcatcgcgcggttcgtacaagataaagcgctaaagaaaatcctgcgggcgaccgat
ggtttaggtacggaagcgacgcgagcggggatcatcgaattgctgttcaagcgggcgttt
ctgtacaagaagggacgctatattcactccagcgaaaccgggcgcacattgattcactcg
ctgccggatcttgctgcgcgccctgatatgacggccaactgggaagccacgctgacgcaa
atcagcgagaaatcctgccgctatcaggactttatgcagccgttggtcggcacgctgcaa
gagctgatttatcaggccaagcagagccgggcgagcatggcgtttcgtggattgccgccg
ccgccctccagcggaggcaaaaaacgcaggaaaagcgccggcaaggcgcaggagaagagt
gaatga
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