Entry |
|
Symbol |
rnd
|
Name |
|
KO |
|
Organism |
smw Serratia marcescens WW4
|
Brite |
KEGG Orthology (KO) [BR:smw00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:smw03016]
SMWW4_v1c27720 (rnd)
Enzymes [BR:smw01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SMWW4_v1c27720 (rnd)
Transfer RNA biogenesis [BR:smw03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SMWW4_v1c27720 (rnd)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3005566..3006687)
|
AA seq |
373 aa
MNYQLITTDAGLQQVCEQARKHAQIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
KQWQPFVDLLADTAVVKFLHAGSEDLEVFLNAFKTLPTPMVDTQILAAFTGRPLSCGFAT
LVAEYMKVELDKSESRTDWLARPLTERQCVYAAADVFYLLPMAKQLVQETEEAGWTAAAN
NECLLLCQRRSETLAPALAYREISNAWQLRPRQLGCLQKLAEWRLRQARERDLAVNFVVR
EENLWQVARYMPSSLGELDSLGLSGPEIRYHGKTLLALVAEAEALDESELPAPLANLIDQ
PGYKKVFKDIKAAIATVSEQSGLSSELLASRRQINQLLNWHWKLKDGESRPELISGWRGD
LLMVPLQDILKDY |
NT seq |
1122 nt +upstreamnt +downstreamnt
ttgaattatcagttgatcactaccgatgccggattgcagcaggtctgcgagcaggcgaga
aagcatgcccagattgcgctggacaccgagtttgtcagaacgcgcacctactatccgcag
ctgggcctgatccagctctacgacggtgaacaactctcccttatcgatcctctgccgatc
aagcaatggcagccgtttgtcgacctgctggccgacaccgccgtggtgaagttcctgcat
gccggcagtgaagatctcgaagtgtttctcaacgcctttaaaacgctgccgacgccgatg
gtcgacactcagatcctggctgcctttaccggccggccgctctcctgtggcttcgcgacg
ctggtggcggagtatatgaaggttgagctggacaagagcgagtcgcgcaccgactggctg
gcgcgcccgctgaccgaaaggcaatgcgtgtacgcggccgccgacgtgttctatctgctg
ccgatggctaaacagttggtgcaggagaccgaagaggccggttggaccgcggcggccaat
aacgagtgcctgctgctgtgccagcgccgtagcgagacgctggcgccggcattggcctat
cgcgaaatcagcaacgcctggcagctgcgcccgcgtcagctcggttgtctgcagaagttg
gcggaatggcggctgcgccaggcgcgtgagcgcgatctggcggtgaactttgtggtgcgt
gaggagaacctgtggcaggtggcgcgctatatgccgtcttcgctgggagaactggattcg
ctgggtctgagcgggccggagatccgttatcacggtaaaacgctgctggcgctggtggcg
gaggccgaagcgctggacgagtccgagttgccggcgccgttggccaaccttatcgatcag
ccgggctacaagaaggtgttcaaagacatcaaggcggcgatcgctaccgtcagcgagcaa
agcgggttgagcagcgagctgctggcatcccgtcgccaaattaaccaattgttgaactgg
cattggaaactgaaggacggcgagagtcgccctgaattaatcagcggctggcgcggcgat
ttattaatggtgccgttgcaggacatcctgaaagattattaa |