KEGG   Serratia marcescens WW4: SMWW4_v1c27720
Entry
SMWW4_v1c27720    CDS       T02448                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
smw  Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:smw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smw03016]
    SMWW4_v1c27720 (rnd)
Enzymes [BR:smw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SMWW4_v1c27720 (rnd)
Transfer RNA biogenesis [BR:smw03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SMWW4_v1c27720 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: AGE18567
LinkDB
Position
complement(3005566..3006687)
AA seq 373 aa
MNYQLITTDAGLQQVCEQARKHAQIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
KQWQPFVDLLADTAVVKFLHAGSEDLEVFLNAFKTLPTPMVDTQILAAFTGRPLSCGFAT
LVAEYMKVELDKSESRTDWLARPLTERQCVYAAADVFYLLPMAKQLVQETEEAGWTAAAN
NECLLLCQRRSETLAPALAYREISNAWQLRPRQLGCLQKLAEWRLRQARERDLAVNFVVR
EENLWQVARYMPSSLGELDSLGLSGPEIRYHGKTLLALVAEAEALDESELPAPLANLIDQ
PGYKKVFKDIKAAIATVSEQSGLSSELLASRRQINQLLNWHWKLKDGESRPELISGWRGD
LLMVPLQDILKDY
NT seq 1122 nt   +upstreamnt  +downstreamnt
ttgaattatcagttgatcactaccgatgccggattgcagcaggtctgcgagcaggcgaga
aagcatgcccagattgcgctggacaccgagtttgtcagaacgcgcacctactatccgcag
ctgggcctgatccagctctacgacggtgaacaactctcccttatcgatcctctgccgatc
aagcaatggcagccgtttgtcgacctgctggccgacaccgccgtggtgaagttcctgcat
gccggcagtgaagatctcgaagtgtttctcaacgcctttaaaacgctgccgacgccgatg
gtcgacactcagatcctggctgcctttaccggccggccgctctcctgtggcttcgcgacg
ctggtggcggagtatatgaaggttgagctggacaagagcgagtcgcgcaccgactggctg
gcgcgcccgctgaccgaaaggcaatgcgtgtacgcggccgccgacgtgttctatctgctg
ccgatggctaaacagttggtgcaggagaccgaagaggccggttggaccgcggcggccaat
aacgagtgcctgctgctgtgccagcgccgtagcgagacgctggcgccggcattggcctat
cgcgaaatcagcaacgcctggcagctgcgcccgcgtcagctcggttgtctgcagaagttg
gcggaatggcggctgcgccaggcgcgtgagcgcgatctggcggtgaactttgtggtgcgt
gaggagaacctgtggcaggtggcgcgctatatgccgtcttcgctgggagaactggattcg
ctgggtctgagcgggccggagatccgttatcacggtaaaacgctgctggcgctggtggcg
gaggccgaagcgctggacgagtccgagttgccggcgccgttggccaaccttatcgatcag
ccgggctacaagaaggtgttcaaagacatcaaggcggcgatcgctaccgtcagcgagcaa
agcgggttgagcagcgagctgctggcatcccgtcgccaaattaaccaattgttgaactgg
cattggaaactgaaggacggcgagagtcgccctgaattaatcagcggctggcgcggcgat
ttattaatggtgccgttgcaggacatcctgaaagattattaa

DBGET integrated database retrieval system