KEGG   Serratia marcescens WW4: SMWW4_v1c32340
Entry
SMWW4_v1c32340    CDS       T02448                                 
Name
(GenBank) LuxR family transcriptional regulator
  KO
K18098  LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
smw  Serratia marcescens WW4
Pathway
smw02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smw00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMWW4_v1c32340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smw03000]
    SMWW4_v1c32340
Transcription factors [BR:smw03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    SMWW4_v1c32340
SSDB
Motif
Pfam: GerE Autoind_bind Sigma70_r4_2 Sigma70_r4 HTH_28 HTH_23 HTH_10 HTH_30 Terminase_5 HTH_29 HTH_Crp_2 Xre-like-HTH HTH_38 HTH_24 HTH_5 Sigma70_ECF HTH_Tnp_ISL3 HTH_11 HTH_17 HTH_40
Other DBs
NCBI-ProteinID: AGE19028
LinkDB
Position
complement(3485822..3486550)
AA seq 242 aa
MSDEIAQRAFQTALAMDHERTLSAIQGRVRVFAAPFGFNRFVLFSASAAAEAGIEHIYWV
EGDWFGEGEAVDALTYVRHCPVTRHMLRAAEPFFWTKTRAQQGERYRIVRTPRGAGLHGV
QIPVFGPAGLEGAVSLGGERIDASPPVRLALSLVGAAAFLAARRLFEPAAGEREGRLSAR
EREVLSWTAIGRRQADIAAMLGLSERTVENHLRRIRQRLGAATTAQAISVAIRLGEIAPD
SR
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagcgacgagatcgcgcagcgcgctttccagacggcgttggcgatggaccacgagcgc
accttgtccgccattcaggggcgggttcgcgtcttcgccgcgccgttcggtttcaaccgc
tttgtgctgttttccgcctccgcggcggcggaggcggggatcgagcatatctactgggtc
gagggcgactggttcggtgagggggaggcggtcgacgcgctgacctacgtgcggcactgc
ccggtgacccggcacatgctgcgggccgcagaaccgttcttctggaccaaaacccgggcg
cagcagggcgagcgctaccggattgtgcgcacgccgcgcggcgccggtctgcacggcgta
cagatcccggtattcggccccgccgggttggagggggcggtcagcctggggggcgagcgc
atcgacgcctcgccgccggtgcggctggcgctgtcgctggtgggcgcggcggcttttctg
gcggcgcggcggctgttcgaacctgctgccggtgaacgggagggccggctgtcggcgcgc
gagcgcgaggtgctgagctggaccgccattggccggcggcaggcggatatcgccgcgatg
ctcggcctgtctgaacgcacggtggaaaaccacctgcggcgcattcgccaacgtctcggc
gccgccaccaccgcgcaggcgatcagcgtggcgatccgcctgggcgaaatcgcccccgat
agccgttag

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