Serratia marcescens WW4: SMWW4_v1c33500
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Entry
SMWW4_v1c33500 CDS
T02448
Symbol
yejH
Name
(GenBank) putative ATP-dependent DNA or RNA helicase
KO
K19789
DNA repair protein RadD
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c33500 (yejH)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SMWW4_v1c33500 (yejH)
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
Zn_ribbon_3
AAA_16
zf-tcix
AAA_30
Zn_Ribbon_1
SLFN-g3_helicase
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AGE19144
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Position
3616864..3618621
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVEATINHFRRRPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKESAGKVVFGSVQSVARNLPLFDGAFSLLIVDECH
RISDDDDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDGASLFRD
CIYELPLRYMIKNGFLVPPERLDMPIVQYDFSRLEARSNGLFSEADLNRELKRQNRVTPH
IISQIVEYADDRKGVMIFAATVEHAREIHGLLPHGEAALVSAETPPAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHGDSQPVQVFCPACGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDDKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWHTA
ADVLAQQQALRHPDFVVARKRGQFWQVREKVFDYQGRFRRANQLT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctacgcccctaccaactggaagcggtcgaagccaccatcaaccatttc
cggcggcgtcccgaaccggcgctgatcgtgctgccgaccggcgccggcaaaagcctggtg
atcgccgaactggcgaagcgagcccgtgggcgggtgctggtgttggcgcacgtcaaggaa
ctggtggcgcaaaaccacgccaaatactgcgcctacggcctggaggcggacatcttcgcc
gccggtctgcaacaaaaagagagcgccggcaaagtggtgttcggcagcgtgcagtcggtg
gcgcgcaacctgccgctgttcgacggcgccttttcgctgctgatcgtcgatgaatgccac
cgcatcagtgacgacgacgacagccagtaccaacaaatcatccagcatttgcagaaaacc
aacccgcagctgcggctgctggggttgaccgccacgccctatcgtctgggcaagggctgg
atttaccagtatcactaccacggttttacccgcggcgacggcgccagcctgtttcgcgac
tgcatctatgagctgccgctgcgctatatgattaagaacggcttcctggtgccgcctgag
cggctggacatgccgattgtacagtacgatttcagccggctggaggccagaagcaacggc
ctgttcagcgaagcggatctgaaccgcgagctgaagcggcaaaaccgtgtcacgccgcac
attatcagccagattgtggagtacgccgacgatcgcaaaggggtaatgatcttcgccgcc
accgtcgagcacgcccgcgagatccacggcctgctgccgcacggcgaggccgcgctggtc
agcgcagaaacgccgcccgccgagcgcgatgcgctgatcgaggcgttcaaacagcagcag
ttgcgctatctggtcaacgtagcggtattgaccaccggtttcgacgcgccgcacgtcgat
ctgatcgcgatcctgcgcccgaccgagtccgtcagcctgtatcagcagatcgtcggccgc
gggctgcggctggcgcccggcaaggaggattgtctgatcctcgactatgccggcaacccg
cacgatctgtttacgcctgaggtcggcgtcagcaagccgcacggcgacagccagccggtg
caggtgttctgcccggcctgcggcttcgccaatctgttctggggcaagtgcaccgagaac
ggcgatatcatcgagcactacggccgccgctgtcagggctggctggaagacgacgacggc
caccgcgaacagtgcgattaccgcttccggttcaagagctgcccgcactgcggcgcggag
aacgacatcgccgcacgccgctgccatcagtgtcaggaggtgctggtcgatcccgatgac
atgctgaaggcggcgctgaagctgaaagacgcgctggtgctgcgctgcggcggcatggaa
ctgcagagcggccgcgatgacaagggcgaatggctgaaggccacctattacgacgaggac
ggcaccagcaccagcgagcgcttccgcctgcagacgccggcgcagcgcaaagcgttcgag
atgctgttcctgcgcccgcaccagcgcgcgccgggcgtgccgttcgcctggcacaccgcc
gccgacgtgctggcgcaacagcaggcgctgcgccatccggatttcgtggtggcgcgcaaa
cgcggccagttttggcaggtgcgcgagaaagtgttcgattatcaaggccgtttccgccgc
gccaatcaattgacctga
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