Serratia marcescens WW4: SMWW4_v1c34490
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Entry
SMWW4_v1c34490 CDS
T02448
Symbol
truA
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smw03016
]
SMWW4_v1c34490 (truA)
Enzymes [BR:
smw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SMWW4_v1c34490 (truA)
Transfer RNA biogenesis [BR:
smw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMWW4_v1c34490 (truA)
Prokaryotic type
SMWW4_v1c34490 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGE19239
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All DBs
Position
complement(3728201..3729022)
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AA seq
273 aa
AA seq
DB search
MSEVVSPAQPTLKVALGIEYDGSRYYGWQRQQEVASVQERLEQALSKVADAPITVLCAGR
TDAGVHATGQVVHFETTARRKDAAWTMGVNTHLPPDIAVRWVSPVADDFHARFSATARRY
RYIIFNHRYRPAVLQQGVTHFYHPLDADRMHRAAQALLGENDFTSFRAVQCQSRTPWRCV
KHVKVTRYGEYIVVDIKANAFVHHMVRNIVGSLMEIGCGNQDENWMAELLALKDRNLAAA
TARAEGLYLVAVDYPDHFGLPRPPMGPLFLPDD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtggtctcgcccgctcagccgacgctgaaggtagcgctgggcatcgaatat
gatggcagccgttattacggctggcagcggcagcaagaagtggccagcgtgcaggaacgc
ctggagcaggcgttgagcaaggtggcggatgcgccgattaccgtgctgtgcgccgggcgt
accgacgccggggtgcacgccaccgggcaggtggtgcatttcgaaactaccgcgcgccgc
aaggacgccgcctggacgatgggggtgaatacccatttgccgccggatatcgcggtgcgt
tgggtgagccccgttgccgacgattttcacgcgcgtttcagcgccaccgcgcgccgctac
cgctatatcattttcaaccatcgctaccggccggcggtgctgcagcagggggtaacgcat
ttttatcacccgctggacgccgatcgcatgcatcgggcggcgcaggcgctgctgggcgag
aacgatttcacgtcgttccgcgcggtgcaatgccagtcgcgcaccccgtggcgctgcgta
aaacacgttaaggttacgcgctacggcgaatatattgtggtagatatcaaggcgaatgcc
ttcgtgcatcacatggttcgcaacatcgtcggcagcctgatggagatcggctgcggcaat
caggatgagaactggatggccgagttgctggcactgaaggatcgcaatctggcggcggcg
acggcgcgagccgaggggctgtatctggttgccgtggattaccctgaccactttggtctg
ccgcggccgccgatggggccgctgtttttgcccgacgattaa
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