Serratia marcescens WW4: SMWW4_v1c37060
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Entry
SMWW4_v1c37060 CDS
T02448
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SMWW4_v1c37060 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c37060 (xseA)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SMWW4_v1c37060 (xseA)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SMWW4_v1c37060 (xseA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGE19493
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All DBs
Position
4005075..4006373
Genome browser
AA seq
432 aa
AA seq
DB search
MGQIWLSAEISNLSQPASGHWYFTLKDDRAQVRCAMFRNSNRRVTFRPQNGQQVLVRASI
TLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQRLSAEGLFDQQFKQPLPAPAKCVGVIT
SASGAALHDILQVLQRRDPSLPIVIYPTSVQGAEAPMQIVRAIEAANRRDECDVLIVGRG
GGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVADLRAPTPSAAAELVSRN
QLELLRQLQSQQQRLEMAMDYYLAQRQQQFTRIHHRLQQQHPHLRLARQQTLLFKLQRRM
EDGMQQQLRLAARRSERAQQRLAQVQPQGRIHRYQQRVQQQEYRLQQAMERQLNAYRQRF
GVACSQLETVSPLATLARGYSVTQTPRGELLKTTKQAQVGELLKTRLQDGWVESEVKTIT
VAKKPRKKRAAE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggggcagatttggctctccgccgagatctccaacctctcccagcccgcctccggccac
tggtatttcacgctgaaagacgaccgcgcccaagtgcgctgcgcgatgttccgcaacagc
aaccgacgcgtcaccttccggccgcaaaacggccagcaggtcttggtgcgcgccagtatc
acgctgtatgaaccgcgcggcgactatcagctgatcgccgagagcatgcagcccgccggc
gacggcctgctgcagcaacagttcgagcagttgaaacagcgcctgagcgccgaagggctg
ttcgatcagcagttcaagcagccgctgcccgccccggccaaatgcgtcggggtgatcacc
tccgccagcggcgcggcgctgcacgatatcctgcaggtgttgcagcggcgcgatccgtcg
ttgccgatcgtcatctaccccacctcggtgcagggtgcggaagcgccgatgcagatcgtg
cgcgccatcgaggccgccaaccgccgcgatgaatgcgacgtgctgatcgtcggccgcggc
ggcggttcgctggaagatctgtggagcttcaacgacgaacgcgtggcgcgagcgatcttc
gccagccgcattccgatcgtcagcgccgtcggccacgaaaccgacgtcaccatcgccgac
ttcgttgccgacctgcgcgcgccgaccccatccgccgccgccgaactggtgagccgcaat
cagcttgagctgttgcgccagctgcagtcgcagcagcagcggctggagatggcgatggat
tactacctggcgcagcgccagcagcagttcacccgcattcaccaccgtttacagcagcag
catccgcatctgcgcctggcgcgccagcagacgctgctgttcaagctgcagcgccggatg
gaagacggcatgcagcaacagctgcgcctggccgcccgccgcagcgagcgcgcccagcag
cggctggcgcaggtgcagccgcagggccgcattcaccgctaccaacagcgcgtgcagcag
caggaataccgtctgcagcaggcgatggagcggcagctcaacgcctaccgccagcgcttc
ggcgtggcctgcagccagctggagaccgtcagcccgctggcgacgctggcacgcggctac
agcgtgacgcaaactccgcgcggcgaactgctgaaaaccaccaagcaggcgcaggtcggc
gaactgctgaaaacccgtctgcaggatggctgggtggaaagcgaggtgaaaaccatcacc
gtcgccaagaagccgcgcaagaaacgcgcggccgaatag
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