Serratia marcescens WW4: SMWW4_v1c37840
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Entry
SMWW4_v1c37840 CDS
T02448
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMWW4_v1c37840 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c37840 (ung)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SMWW4_v1c37840 (ung)
DNA repair and recombination proteins [BR:
smw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMWW4_v1c37840 (ung)
Prokaryotic type
SMWW4_v1c37840 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGE19571
LinkDB
All DBs
Position
4091259..4091942
Genome browser
AA seq
227 aa
AA seq
DB search
MATSLTWHDVIGKEKEQPYFVETLAFVAAERQAGKTIYPPQKDVFNAFRFTELADVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLVNMYKELATDIPGFERPDHGYLQSWAEQGVL
LLNTVLTVEGGRAHSHANLGWETFTDKVIAALNENREGVVFLLWGSHAQKKGNFIDRNRH
HVLKAPHPSPLSAHRGFLGCRHFSQANQLLEQQGLTPIDWMPRLPQA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccctcacctggcatgacgtgatcggcaaagagaaagagcagccctatttt
gttgaaacgctcgcctttgttgccgctgagcgccaggccggtaagaccatttatccaccg
cagaaagacgtgtttaacgcgttccgctttaccgagctggcggacgtcaaagtcgtcatc
ctcggccaggatccctaccacggccccaatcaggcgcacggtctctctttctcggtgcgc
cccggcgtgccggcgccgccgtcgctggtgaacatgtataaagagctggcaaccgacatt
cccggtttcgaacgcccggatcacggctacctgcaaagctgggccgaacagggggtactg
ctgctcaacaccgtgctgacggtggaaggcggccgcgcgcactcgcacgccaatttgggc
tgggaaacctttaccgataaagtgatcgccgccctgaacgagaaccgcgaaggcgtggtg
ttcctgctgtggggctcgcacgcgcagaagaaaggcaactttatcgaccgcaaccgccac
catgtgctgaaagcgccacacccatcgccgctttccgcccaccgcggtttcctcggctgc
cgccacttctcgcaggccaatcagctgctggagcagcaagggctcacgccgatcgactgg
atgccgcgtctgccgcaggcgtag
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