KEGG   Serratia marcescens WW4: SMWW4_v1c38470
Entry
SMWW4_v1c38470    CDS       T02448                                 
Symbol
nrdE
Name
(GenBank) ribonucleoside-diphosphate reductase 2, alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
smw  Serratia marcescens WW4
Pathway
smw00230  Purine metabolism
smw00240  Pyrimidine metabolism
smw01100  Metabolic pathways
smw01232  Nucleotide metabolism
Module
smw_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
smw_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:smw00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SMWW4_v1c38470 (nrdE)
   00240 Pyrimidine metabolism
    SMWW4_v1c38470 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smw03400]
    SMWW4_v1c38470 (nrdE)
Enzymes [BR:smw01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SMWW4_v1c38470 (nrdE)
DNA repair and recombination proteins [BR:smw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SMWW4_v1c38470 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN RNR-II_ins_dom
Other DBs
NCBI-ProteinID: AGE19634
LinkDB
Position
4143629..4145773
AA seq 714 aa
MATTELTRPETGALDYHSLNAMLNLYDAEGRIQFDKDRLAARHYFLQHVNQNTVFFHNLE
EKLRYLVEEGYYEPQVLAQYEFPFIKQLFQQAYAKKFRFETFLGAFKYYTSYTLKTFDGK
RYLERYEDRVCMVAMTLAAGDTALAQDLVEEMISGRFQPATPTFLNCGKRQRGELVSCFL
LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNIREVGAPIKRIENQSSGVIPIMKMLED
AFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELA
KNNEEMYLFSPYDVERVYGVPFSEIAVSEKYREMVDDKRIRKSRINAREFFQVLAEIQFE
SGYPYVMFEDTVNRENPIAGRINMSNLCSEILQVNRASTYHEDLSYDRIGKDISCNLGSL
NIAKTMDAPDFGKAIETAIRALTAVADMSDIRSVPSIAEGNRSARAIGLGQMNLHGYLAR
ERIFYGSEEGIDFTNLYFYTVAYHAIRASNRLAIERGGAFDGFEHSRYASGEYFDKYTER
DWLPQTERVRELFAAAGIAIPGRDEWRALRQSVMMHGLYNQNLQAVPPTGSISYINNATS
SIHPIVSRIEIRKEGKIGRVYYPAPYMTNDNLAYYQDAYEIGPEKIIDTYAAATQHVDQG
LSLTLFFRDTATTRDINRAQIYAWRKGIKTIYYIRLRQMALEGTEVQGCVSCSL
NT seq 2145 nt   +upstreamnt  +downstreamnt
ttggcaacgacagaactgaccaggcccgagacgggcgcgctggattaccattcgctcaac
gcgatgctcaatctttacgatgcggaaggccggatccagttcgacaaggatcggctggcg
gcgcggcactacttcctgcagcacgtcaaccaaaacaccgtgttcttccataacctggag
gaaaagctgcgctatctggtggaagaaggctactacgagccgcaggtgctggcgcagtac
gagttcccgtttatcaagcagctgttccagcaggcctacgccaaaaaattccgcttcgag
accttcctcggcgccttcaagtactacaccagctatacgctcaaaaccttcgacggcaag
cgctatctggaacgctacgaagatcgggtgtgcatggtggcgatgacgctggcggcgggc
gataccgccctggcgcaggatctggtggaggagatgatttcgggccgcttccagccggcc
acgccgaccttcctcaactgcggcaaacgccagcgcggcgaactggtctcctgcttcctg
ctacgcatcgaagacaatatggaatcgatcggccgggcggtgaactccgcgctgcagctg
tcgaaacgcggcggcggcgtggccttcctgctgagcaatattcgcgaagtgggcgcgccg
atcaagcgcatcgagaaccagtcttccggcgtcattccgatcatgaaaatgctcgaagat
gccttctcctacgccaaccagctcggcgcacgccagggagccggcgcggtatatctcaac
gcccaccacccggacattctgcgttttctcgacaccaagcgggaaaacgccgacgagaag
atccgcatcaaaacgctgtcgctgggggtggtgatcccggatatcacctttgagctggcg
aagaacaacgaggagatgtacctgttctcgccctacgacgtcgagcgggtgtatggcgtg
ccgttttcggagattgccgtcagcgagaagtaccgcgagatggtggacgacaagcgcatc
cgcaagtcgcgcatcaatgcgcgcgaattcttccaggtgctggcggagatccagttcgaa
tccggctacccgtatgtcatgttcgaggacacggtcaaccgggagaacccgatcgccggt
cgcatcaacatgagcaacctgtgttcggagatcctgcaggtcaaccgcgccagtacgtat
catgaagatctgagctacgatcgcatcggcaaggacatctcctgcaacctcggctcgctg
aacatcgccaaaaccatggacgcaccggacttcggcaaagcgatcgagaccgcgatccgt
gcgctgaccgcggtggccgacatgagcgacatccgctcggtgccgtcgatcgccgaaggc
aaccgcagcgcccgcgccatcggtctcggtcagatgaacctgcacggttacctggcgcgc
gagcgtatcttctacggctcggaagaaggcatcgacttcaccaatctctatttctatacc
gtggcctatcacgccatccgcgcctcgaatcggctggcgatcgagcgcggcggcgccttt
gacggctttgagcactcgcgctatgccagcggcgagtacttcgacaaatacaccgaacgc
gactggctgccgcagaccgagcgggtgcgcgagctgttcgccgccgccggcatcgccatt
ccggggcgcgacgagtggcgcgcgctgcgccagtcggtgatgatgcacgggttgtacaac
cagaacctgcaggcggtgccgccgaccggttccatctcgtacatcaacaacgccacctcc
agcatccacccgatcgtctcgcgcatcgagatccgcaaggaaggcaagatcggccgcgtt
tactacccggcgccttacatgaccaacgacaacctggcgtattaccaggatgcctacgag
attggcccggaaaaaatcatcgatacctatgccgccgcgacgcaacacgtcgatcagggg
ctgtcgctgacgttattcttccgcgataccgccaccacccgcgacatcaaccgcgcgcag
atctacgcctggcgcaaaggcatcaagaccatttactacatccgcctgcgccagatggcg
ctggaaggcaccgaggtgcagggctgcgtgtcctgctcgctgtga

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