Serratia marcescens WW4: SMWW4_v1c38880
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Entry
SMWW4_v1c38880 CDS
T02448
Name
(GenBank) lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00310
Lysine degradation
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SMWW4_v1c38880
Enzymes [BR:
smw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SMWW4_v1c38880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AGE19675
LinkDB
All DBs
Position
complement(4192245..4194383)
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AA seq
712 aa
AA seq
DB search
MNVIAIMNHMGVYFKEEPIRELHQALESLDFRIVYPNDREDLLKLIENNARLCGVIFDWD
KYNLELCEEISQLNEYMPLYAFANTYSTLDVSLNDLRMQVRFFEYALGAATDIAAKIKQN
TDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDI
SISVSELGSLLDHSGPHKEAEEYISRVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQRATIAKRVKDTPNATWPVH
AVITNSTYDGLLYNTDFIKNTLDVKSIHFDSAWVPYTNFHPIYKGKCGMSGGRVEGKVIY
ETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA
GKRLIHGSIERAIKFRKEIKRLKVESDGWFFDVWQPEHIDEPECWPLRSDSAWHGFKNID
NEHMYLDPIKVTILTPGMSKEGEMQPFGIPASIVAKYLDERGIIVEKTGPYNLLFLFSIG
IDKTKALSLLRAMTDFKRSFDLNLRVKNMLPSLYQEAPDFYENMRIQDLAQNIHRLVEQH
NLPDLMYRAFEVLPTMVMNPYQAFQKELHGEVEEVYLEEMVGKVNANMILPYPPGVPLVM
PGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYRVKVLKAK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttatcgccatcatgaatcacatgggtgtctactttaaagaagagcctatccgt
gaactgcatcaggcgctggaaagtctggatttccgcatcgtttaccctaacgatcgcgaa
gacctgctgaaactgatcgagaacaacgcccgcttgtgcggggtgatcttcgactgggac
aaatacaacctggagctgtgcgaagagatcagccagctgaacgagtacatgccgctgtac
gccttcgccaacacctattcgacgctggacgtcagcctgaacgatctgcgcatgcaggtg
cgcttcttcgagtatgcgctcggcgcggcaaccgacatcgccgccaagatcaaacagaat
accgacgaatatatcgacaccatcctgccaccgctgaccaaggcgctgttcaaatacgtg
cgcgaaggcaaatacaccttctgtacgccgggccacatgggcggcaccgcgttccagaaa
agcccggtcggcagcctgttctacgatttcttcggcccgaacaccatgaagtcggatatc
tcgatttcggtgtctgaactgggatcgctgctggatcactccggcccgcacaaagaggcg
gaagagtatatttctcgcgtgttcaacgccgaacgcagctacatggtcaccaacggcact
tccactgccaacaagatcgtcggcatgtattcggcgccggcgggcagcacggtgctgatt
gaccgtaactgccacaagtcgctgactcacctgatgatgatgagcgacatcacgccgatc
tatttccgcccgacccgcaacgcttacggcatcctcggcggtattccgcagagcgagttc
cagcgcgccaccatcgccaaacgcgtgaaggataccccgaacgccacctggccggtgcac
gcggtgatcaccaactccacctatgatggcctgctgtacaacaccgactttatcaagaac
accctggacgtgaagtctatccacttcgattccgcctgggtgccttacaccaatttccac
ccgatctataaaggcaagtgtggcatgagcggcggccgcgtggagggcaaggtgatctat
gaaacccagtccacccacaaactgctggcggccttctcgcaggcgtcgatgatccacgtg
aagggcgacatcaacgaagagaccttcaacgaagcctacatgatgcacaccaccacttcg
ccgcactacggcattgtggcctcgaccgaaaccgctgcggcgatgatgaaaggcaacgcc
ggcaagcgcctgatccacggttctatcgaacgcgcgatcaagttccgtaaagagatcaaa
cgcctgaaagtcgagtccgacggctggttcttcgacgtctggcagccggagcatatcgat
gagccggaatgctggccgctgcgctccgacagcgcctggcacggtttcaagaacatcgac
aatgaacacatgtatctggatccaatcaaggtcaccattctgacgccggggatgagcaag
gaaggcgagatgcagccgttcggcatcccggccagcatcgtggcgaaatacctcgacgag
cgcggcatcatcgtcgagaaaaccggaccgtacaacctgctgttcctgttcagcatcggc
atcgataaaaccaaggcgctcagcctgctgcgcgcgatgaccgacttcaaacgttcgttc
gacctgaacctgcgggtgaaaaacatgctgccttcgctgtatcaggaagcgcctgatttc
tatgaaaacatgcgcattcaggatctggcgcagaacattcaccgcctggtggagcaacac
aacctgccggacctgatgtaccgcgcattcgaagtgctaccaaccatggtgatgaacccg
tatcaggcgttccagaaagagctgcacggcgaagtggaagaggtctatctggaagagatg
gtcggtaaggtcaacgccaacatgatcctcccatacccgccgggcgtgccgctggtgatg
ccgggcgagatgctgaccgaagagagccggccggtgctggagttcctgcagatgctgtgc
gaaatcggcgcgcattatccgggctttgaaaccgacattcacggcgcctaccgtcaggcg
gacggacgttatcgggtgaaagtgctgaaggcgaaataa
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