Serratia marcescens WW4: SMWW4_v1c39370
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Entry
SMWW4_v1c39370 CDS
T02448
Symbol
recC
Name
(GenBank) exonuclease V (RecBCD complex), gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMWW4_v1c39370 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c39370 (recC)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SMWW4_v1c39370 (recC)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMWW4_v1c39370 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
AGE19724
LinkDB
All DBs
Position
complement(4260657..4264028)
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKTLTSALIARDPLTDPFQQEVVLVQSPGMAQWLQMQLAEQFGIAANV
AFPLPATFIWDMFTRVLPDIPKESAFSKEAMTWKLMWLLPEMLTQPAFAPLQHYLTDDGD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQRGERIDGLAEAQQWQAPLWARLVEYTRELG
QPEWHRANLYSRFIHALEQAKTCPPGLPPRVFICGISALPPIYLEALQALGRHIDIHLMF
TNPCRYYWGDIQDYAFLARLQSRKRRHYHQAREQGLFREPDDAARLFDAEGQQQLSNPLL
ASWGKLGRDHLYLLSQMEGAQEVDAFVDIPADTMLHAVQRDMLELEDHAVIGITAETLES
SFSKRPLDENDRSLSLHACHSPQREVEVLHDQLLTMLAQDPALTPRDIIVMVADIDSYTP
YIQAVFGNAPAERYLPFAISDRKARQAHPALQAFISLLDLPQSRFTSEQVLALLEVPALA
ARFAIGEEGLRLLRHWVGESGVRWGLDDDNVRELDLPATGQHTWRFGITRMLLGYAMDSN
AGDWQGILPYDESSGLVAELAGQLADLLAQLSHWRQILSEARPLEAWLPLCRQLLDAFFA
ADSDTEVVLALIEQQWQQAINFGLAARYPDEVPLTILRDDLAARLDQERISQRFLAGQIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAQQVKRGDRSRRDDDRYLFLEAI
LSAQQRLYISFIGRSIQDNSPRYPSVLVTELLEYLEQSYCLPGDEELSADDSARRVGEHL
LKWHARMPFAAENFLPGSEAQSYAAEWLPAADGRGAAHPAFNQPLPAEALQQISLDELLR
FYRHPIRAFFQLRLGVSFILEETELPDEEPFTLDNLSRYQFNSQLLNTLIDGDDPERLFQ
RVRAAGGLPYGAFGEIYWQKQQEEMSELAEQVRAERAESHSLELDIDIAGVRLSGWLHQV
QDDGLLRWRPATLSAVDGILLWLEHLVYCRAGGTGESRIYGRKNSAWRFAALAPEEAQAQ
LAELLAGYQRGLCQPLLLLNKSGWAWLSQCYQPETQQIDWEEEAQTKARAKLLQAWQGDQ
RIPGEGEDPYVQRVFRQLDNEYLAQILAETERYLLPVARHNLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattccaatcagctggatttgttgaaaacgctgaccagcgcgctg
atagccagagatccgttgaccgatccttttcaacaggaggtggtgctggtgcaaagcccc
ggtatggcgcaatggctgcagatgcagctggcggaacagttcggtatcgccgccaatgtc
gcgtttccgctgccggcgaccttcatttgggacatgttcacccgggtgttgccggatatt
ccgaaagagagcgccttcagcaaggaggccatgacctggaagctgatgtggttgttaccg
gagatgttgactcagccggcgtttgcgccactgcagcactatctgaccgatgacggcgac
aagcgcaaaatccaccagttggctggccgggtcgccgacctgttcgaccaatatttggtt
tatcgcccgcagtggctggagagctggcagcgcggcgagcgcatcgacggtctggcggag
gctcagcaatggcaggcgccgctctgggcgcgactggtggaatacacgcgcgaattgggg
cagccggaatggcaccgcgccaatctgtacagccgctttatccacgcgctggagcaggca
aaaacgtgcccgcccggtttgccgccgcgggtgtttatctgcggcatctcggcattgccg
ccgatctatctggaagcgctgcaggcgctggggcggcatatcgacatccacctgatgttc
accaacccctgtcgctactattggggtgatattcaggattacgcctttctggcccgcttg
cagagccgcaagcgtcgtcactatcatcaggcgcgcgagcaagggctgttccgcgagccg
gatgacgcggcgcgcctgtttgacgccgaagggcagcagcaactcagcaacccgctgctg
gcctcctggggcaagctggggcgcgatcacctttacctgctgtcgcagatggaaggggcg
caagaggtcgacgcctttgtcgatatcccggccgataccatgctgcacgccgttcagcgc
gatatgctggaactggaagaccatgcggtaatcggtattaccgcggaaacgctggaaagc
agcttcagcaaacgtccgcttgatgaaaacgaccgctccctcagcctgcacgcctgccac
agcccacagcgggaagtggaggtgctgcacgatcaactgctgaccatgcttgcgcaggat
cccgcgttgacgccgcgcgacatcatcgtgatggtggcggatatcgacagctacacgcct
tacattcaggcggtgttcggcaatgcccccgccgagcgctacctgccgtttgccatttct
gaccgtaaagcgcgccaggcgcatccggctttgcaggcgttcatctccctgctcgatttg
ccgcaaagccgctttacgtcggaacaggtgctggcgctgctggaagtacctgccctggcc
gcccgtttcgccattggcgaagaggggttgcgcctgttgcgtcactgggtcggtgaatcc
ggcgtgcgctggggtctggacgacgataacgtgcgcgaactggatctgcccgccaccggc
cagcacacctggcgattcggcattacgcgcatgctgctcggttacgcgatggacagcaac
gccggcgattggcagggcattttgccttacgatgaatcgagcgggttggtcgccgaactg
gcggggcaactggcagacctgctggcgcagctcagccactggcggcaaatcttgagcgaa
gcgcgcccgctcgaggcgtggctgccgctgtgccgccaactgctggatgccttcttcgca
gcggacagcgataccgaagtggtgctggcattgattgagcagcagtggcagcaggccatt
aattttggcttggcggcgcgctatcccgatgaggtgccgttgaccattctgcgcgacgat
ctggcggcgcgcctcgatcaggagcgcatcagccagcgcttcctcgccgggcaaatcaac
ttctgtacgctgatgccgatgcgctcgattccgttcaaggtggtgtgcctgctgggcatg
aacgacggcgtgtatccgcgcacgctgccgccgctgggctttgatctgatggcgcagcag
gtcaagcgcggcgaccgcagccgccgcgatgacgaccgatatctgttcctggaagcgatt
ctgtccgctcagcagcggctatatatcagcttcatcggccgttccattcaggacaacagc
ccgcgctacccttctgtgctggtcactgagctgcttgagtacctggagcaaagctattgc
ctgccgggagatgaggaactcagcgcagacgacagcgcccggcgggttggtgagcacttg
ctgaagtggcatgcgcgcatgccgttcgccgccgagaatttcttgccgggctcggaggcg
caaagctatgccgccgagtggctgcccgccgcagatggtcgcggtgcggcgcatccggcg
ttcaaccagccgctgcctgccgaagcgctgcagcaaatatcattggatgagctgctgcgg
ttttaccgccatccgattcgcgcgtttttccaattgcggttgggcgtcagttttatcctg
gaagagactgagctgccggacgaagagcccttcacgctggataacctcagccgctaccag
ttcaacagccaactgctgaataccctgatcgacggcgacgatcccgaacggttgttccag
cgggtgcgtgccgccggcggcttgccctatggcgcctttggcgagatctattggcaaaag
cagcaggaagagatgagcgaactggccgagcaggtgcgtgcggaacgcgcagagagccat
agcctggaattggatatcgatattgccggcgtacgtctcagcggctggctgcatcaggtg
caggatgacggcctgttgcgctggcggcccgccacgttgtcggcggtggatggcatattg
ctgtggctggagcacctggtgtactgccgcgccggcggcaccggcgagagccgcatctac
ggccgcaagaactccgcctggcgctttgccgcgctggcgcctgaagaggcgcaggcgcag
ttggcggagctgctggcgggttatcagcgcggtctgtgtcagccgctgttgttgctgaac
aagagcggctgggcgtggctgagtcagtgctatcagccggaaacacagcaaatcgactgg
gaggaagaagcgcaaacaaaggctcgcgccaaattgctgcaggcctggcagggcgatcag
cgcattcccggagaaggggaagatccctacgttcagcgagtgttccgccaattggataat
gaatacttagcgcaaatactggccgaaacagagcgttatctgctgccggtggcgcgtcat
aacctggggtaa
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