Serratia marcescens WW4: SMWW4_v1c39910
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Entry
SMWW4_v1c39910 CDS
T02448
Symbol
idnR
Name
(GenBank) 5-gluconate-binding transcriptional repressor
KO
K06146
LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c39910 (idnR)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SMWW4_v1c39910 (idnR)
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Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_10
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AGE19778
LinkDB
All DBs
Position
4318436..4319431
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AA seq
331 aa
AA seq
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MVKSQRITLNDIAVLAGVTKMTVSRYLRTPDRVKPETAARIAAVIEEVGYQADPDNPALY
SNSPPLIGVLVPSFNNLIFADVLAGIESVTSVQGYQTLVVNYDYNSKREEEQIAAILAFK
IKGLLLTESVHSLRAEKFLKTAKIPVAEIMGLSGNADRINVGFDNVKAGYDMTTMLLASG
KKRIIYFGSMSDIRDEQRYTGYCQAMANHDLPTGRISPNKISSISIGTGMMTLASQMYPD
MDGILCTNDDLAVGVLQECLANGISVPAQIAIAGFHGLEIGQIITPRLASVLTPRYEMGK
VATEIIIKKIKGLPTIERVDLHFRLSMGETI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcgcagcgcattacgttaaatgacattgctgtactggctggtgtcaccaaa
atgacggtcagccgctatctgcgcacgccggacagggttaaaccggaaaccgctgcgcgc
atcgccgccgtgatcgaggaagtcggctatcaggccgatcctgacaatcccgccctctat
tccaatagccctcccctcatcggcgttctggttccttcttttaacaatctgatatttgct
gatgtcctcgccggcattgaatccgtgacgtctgtacagggttatcagacgctggtcgtc
aattatgactacaacagcaaacgcgaagaggagcaaattgccgcgatcctggcttttaag
atcaaagggctgctgctgaccgagtcggttcatagtctgcgggcggaaaaattcctgaag
acggcaaaaatacccgttgctgaaatcatggggctgtcaggcaatgcagatcgaattaac
gtgggttttgataatgtgaaagccggctacgatatgaccaccatgttgctggccagcggt
aaaaaacgcattatctattttggttcaatgtctgatatccgcgatgaacagcgttacacg
ggatattgtcaggcaatggctaaccatgatttacctaccggtcgtatttcccccaataag
atctcttccatttcaattgggacaggcatgatgacgcttgcgagccaaatgtatccggat
atggatggtattctctgtaccaacgacgatctggccgttggggtgttacaggaatgcctg
gcaaacggtatcagcgttccagcgcaaattgccattgccggatttcacggtcttgagatc
gggcagatcatcaccccccggttagccagcgtactgacgccacggtatgagatggggaaa
gtggcgacagaaatcataataaaaaaaattaaagggctgccgaccattgaacgtgtcgat
ctccacttccgcctgtcaatgggggagacaatatag
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