Serratia marcescens WW4: SMWW4_v1c40020
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Entry
SMWW4_v1c40020 CDS
T02448
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase
KO
K04763
integrase/recombinase XerD
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smw03036
]
SMWW4_v1c40020 (xerD)
Chromosome and associated proteins [BR:
smw03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SMWW4_v1c40020 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AGE19789
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All DBs
Position
complement(4332641..4333576)
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AA seq
311 aa
AA seq
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MARVEMQQREDRVQQQDNALIEQFLDALWLERNLAENTLASYRLDLQALGAWLGQQKTDL
LQAQALDLQAFLAERVDGGYKATSSARLLSAMRRLFQYLYREKLRADDPTAQLASPKLPQ
RLPKDLSEAQVDALLQAPCVDQPLELRDKAMLEVLYATGLRVSELVGLNISDVSLRQGVV
RVIGKGNKERLVPLGEEAVYWIENYLEHGRPWLVNGQTLDVLFPSTRCQQMTRQTFWHRI
KHYAILAGIDSERLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERL
KQLHQQHHPRA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggtggaaatgcaacaaagagaggaccgcgtgcaacagcaagacaatgcgctg
attgaacaattcctggatgcgctgtggcttgagcgcaatctggcggaaaatacgctggcc
tcctatcggctggatttgcaggccctgggcgcctggcttggccagcagaagaccgatttg
ctgcaggcgcaggcgctggatctgcaggcgtttctcgccgagcgggtggatggcggttac
aaagccaccagctccgcgcgtttgttgagcgccatgaggcgcctgtttcaatatctgtac
cgcgaaaagctgcgcgccgacgatcccaccgcgcagctggcgtctcccaaactgccgcag
cgcttgccgaaggatctgagcgaggcgcaggtcgatgcgttgctgcaggcgccctgcgtc
gatcagccgctggagctgcgcgacaaggcgatgctcgaagtgttgtacgccaccgggctg
cgggtttccgagctggtggggctgaacatcagcgacgtcagcctgcgtcagggcgtggtg
cgggtgatcggcaagggcaacaaggagcggctggtgccgctgggcgaagaggcggtctac
tggatcgaaaactatctggagcacggccgcccatggctggtcaacggccagacgctggat
gtgctgttccccagcacccgctgccagcaaatgacccgacagacgttctggcatcgcatc
aaacactatgccatccttgcgggcatcgacagcgagcgtctgtcgccgcacgtgttgcgg
cacgcgttcgctacccatttgctgaaccatggggccgatctccgtgtcgtacagatgttg
ttagggcacagcgatctctcgaccacgcaaatttatactcatgtagcgaccgaacgactg
aaacagctacatcaacagcatcacccgcgcgcctga
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