Serratia marcescens WW4: SMWW4_v1c41170
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Entry
SMWW4_v1c41170 CDS
T02448
Symbol
pdhR
Name
(GenBank) DNA-binding transcriptional dual regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c41170 (pdhR)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SMWW4_v1c41170 (pdhR)
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Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
MarR_2
TrmB
HTH_11
PaaX
HTH_24
HTH_28
HTH_DeoR
HTH_41
Fe_dep_repress
HTH_Crp_2
HTH_36
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGE19904
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Position
complement(4459614..4460378)
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AA seq
254 aa
AA seq
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MAYSKIRQPKLSDVIEQQLEYLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA
KGLLLRRQGGGTFVQTNLWQSFSDPLAELLADHPESQFDLLETRHALEGIAAYYAALRGT
DEDLARIRDCHIVIQQAQDSGDLDAEADAVMQYQIAVTEAAHNVVLLHLLRCMGPMLEQN
VRQNFELLYSRREMLAKVSSHRAGIFEAIVAREPEKAREASHRHLAFIEEILLDLSREHT
RRERSLRRLQQRKD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagcaaaatccgccaacccaagttgtcagatgttatcgagcaacagctcgaa
tacctgatcctcgaggggacactgcgcccaggcgaaaaactgcctccggagcgcgagctg
gcgaaacaatttgatgtctcccgtccttctctgagagaggccattcagcgccttgaagcg
aaagggctgctcctgcgccgtcagggcggcggcaccttcgtgcaaactaatctgtggcag
agcttcagcgatccgctggccgagctgctggccgaccatcccgaatcacagttcgatctg
ctggaaacccgtcacgcgctggaaggcattgccgcctattacgcggcgctgcgcggcacc
gatgaagatctggcgcgcatccgcgactgccatatcgtgattcaacaggctcaagacagc
ggcgatctcgacgccgaggccgatgcggtcatgcagtatcaaatcgccgtgaccgaagcc
gctcacaacgttgtgttacttcacctgctacgctgcatggggccgatgctggaacagaac
gtgcgtcagaactttgaattgctctactcgcgccgtgagatgttggcaaaagtgagcagc
caccgcgccggaatttttgaggcgattgtggcacgcgagccggaaaaggcccgtgaagcc
tcgcatcgccacttggcgtttatcgaggaaatcttgctggatctcagccgggagcatact
cggcgcgagagatcgctgcggcgtctccagcaacgcaaggattaa
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