Serratia marcescens WW4: SMWW4_v1c41480
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Entry
SMWW4_v1c41480 CDS
T02448
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00330
Arginine and proline metabolism
smw00480
Glutathione metabolism
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SMWW4_v1c41480
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SMWW4_v1c41480
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SMWW4_v1c41480
Enzymes [BR:
smw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SMWW4_v1c41480
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGE19935
LinkDB
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Position
complement(4487375..4489543)
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AA seq
722 aa
AA seq
DB search
MMKELKIATSASLVATIETLRQIVRVEQTDYTDVAAAVVSVADVNAGILARLQATGFDIP
TFVAVEGDEHLSPDYLPFVSGVFALLAGASKPFYMAQLEAAADAYEQALLPPFFKTLKTY
VEMENSTFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGSAKD
AQKHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGAT
PIYLETARNPFGFIGGIDAHCFDERYLREQIREVAPEKAAAARPFRLAIIQLGTYDGTIY
NARQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQA
GFSQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGPAGR
RMWMDCVKLGIETRKQLLTRCSQLKPFIPQQVAGKDWQDHDTDLIANDARFFTFVPGETW
HGFEGYAQDQYLVDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNS
ILFLLTPAENPAKMEQLVEMLAQFERYVEEDAPLSVVLPTVYRKNEQRYRGYSIRRLCQE
MHDLYVSFDVKQLQKEMFRQDHFPPVVMNPQDANVEFIRDNVELVPIGQAEGRIAAEGAL
PYPPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMI
KQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagaattgaaaatcgcgaccagcgccagcctggtcgccaccattgagacgctg
cgccagatcgtgcgcgtagagcagacggactacaccgacgtggcggcggcggtggtgtcg
gtcgccgacgtgaacgcaggcattctggcgcgcttgcaggcgacggggttcgacattccg
accttcgtggcggtggaaggggacgagcatctctcgccggactatctgccgtttgtcagt
ggggtttttgcgctgctggccggcgccagcaagccgttctacatggcgcagctggaggcc
gccgccgacgcctacgagcaggcgctgctgccgccgttcttcaaaacgctgaagacctac
gtcgagatggaaaactcaaccttcgcctgcccggggcatcagggcggcgagttcttccgc
aaacacccggccggccggcagtttttcgatttctacggcgagaccctgttccgttccgat
atgtgcaacgccgatgtcaagctgggcgatttgctgatccacgaaggctcggccaaggat
gcgcaaaaacacgcggcgcgggtgttcaacgccgataaaacctacttcgtgctcaacggc
acctcggcggccaacaaggtggtgaccaacgcgctgctgacccgcggcgatctggtgctg
ttcgatcgcaacaaccacaaatccaaccaccatggggcgctgatccaggccggcgccacg
ccgatctatctggaaaccgcccgcaacccgttcggctttatcggcggcatcgatgcgcac
tgcttcgacgaacgctatctgcgtgagcagatccgcgaggtggcgccggagaaagccgcg
gcggcgcggccgtttcggctggcgatcattcagctcggcacttacgacggcacgatttac
aacgctcgccaggtgatcgacaccatcggccacctgtgcgattacattctgttcgactcc
gcctgggtgggttacgaaggctttattccgatgctgaaagagtgctcgccgctgctgctg
gagctggacgagcacgatccgggcattttcgtcacccagtcggtgcataaacagcaggca
gggttctcgcagacctcgcagatccataagaaagacgaccatatcaaagggcaaaagcgc
cactgcaaccacaagcacctgaacaacgcgttcatgctgcatgcgtcgaccagcccgttc
tatccgctgttcgccgcgctggacgtcaacgccaagatgcacgccggccccgccgggcgc
cgcatgtggatggactgcgtcaagctgggcatcgagacgcgcaaacagctgctcacgcgc
tgctcgcagctgaagccgtttattccgcagcaggtggcgggcaaagactggcaggatcac
gataccgatctgatcgccaacgacgcgcgcttcttcaccttcgtgccgggggagacgtgg
cacggcttcgaaggctatgcccaggatcagtatctggtggatccgtgcaagctgctgctg
accacgccggggattgacgccgcgaccggccaatacaccgagttcggcgtgccggccacc
attctggccaacttcctgcgcgagaacggcatcgtgccggagaagtgcgatctcaactcg
atcctgttcctgctgaccccggcggagaacccggccaagatggaacagctggtggagatg
ctggcgcagttcgaacgctatgtcgaagaggatgcgccgctgagcgtggtgctgccgacg
gtgtaccgcaagaacgagcagcgttaccgcggctacagcattcgccggctgtgtcaggag
atgcacgatctgtacgtcagctttgacgttaagcagctgcaaaaggagatgttccgtcag
gatcattttccgccggtggtgatgaacccgcaggacgccaacgtggagtttatccgcgac
aacgtcgagctggtgccgatcggccaggcggaagggcgcatcgcggcggaaggggccctg
ccgtatccgccgggcgtgctgtgcgtggtgccgggcgaagtgtggggcggcgcggtgcag
cgctacttcctggcgttagaagagggcatcaaccgcctgccgggcttctcgccggagctg
cagggggtctacatcgagaaaaaagatcacggctggaagcgcatctttggctatatgatc
aagcagtaa
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