Serratia marcescens WW4: SMWW4_v1c43300
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Entry
SMWW4_v1c43300 CDS
T02448
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
smw
Serratia marcescens WW4
Pathway
smw02020
Two-component system
smw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SMWW4_v1c43300 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SMWW4_v1c43300 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smw03021
]
SMWW4_v1c43300 (rpoN)
Transcription machinery [BR:
smw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMWW4_v1c43300 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AGE20117
LinkDB
All DBs
Position
4684344..4685777
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHDEIDAKE
TQETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESLGDENVTLEEVEAVLK
RVQRFDPIGVAARDLRDCLLVQLSQYAKDTPYLAEARLIISEHLDLLANHDFRSLMRSTR
LKEDTLKEAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKTQNKWTVELNGDSVPRLKIN
QQYAALGNSARSEADGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVDQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLADQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagtcaacagctggccatgactcctcagctccag
caggcgatccgcctgctgcagttgtccacgcttgagcttcagcaagagatccagctggcg
ctggagagcaatccgctgcttgaacagaccgatctgcacgacgaaatcgacgccaaagaa
acccaggagaccgaggggctcgatacccgcgaggcgctggaacagaaagacatgccggaa
gagctgccgctggacgccacctgggatgagatctacaccgccggcacgccgtccggcacc
ggcaccgactacagcgacgacgagctgccggtctatcagggcgagaccacccaaacgctg
caggattacctgatgtggcaggtggatctgacgccgttttccgataccgacgccgccatc
gccacctccatcgtcgacgcggtggacgacaccggctatctcaccgtgccgctggaagac
attctggaaagcctgggcgacgaaaacgtgaccctcgaggaagtcgaggcggtgttgaag
cgcgtgcagcgtttcgatccgatcggcgtcgccgcgcgcgatctgcgcgattgcctgctg
gtgcagctctcccaatacgccaaagacaccccttacctggccgaagcgcggctgatcatc
agcgagcatctggatctgctggccaaccacgactttcgcagcctgatgcgatcaacccgg
ctaaaagaagatacactgaaagaagcgatgctgctgattcagtcgctcgatccgcgcccg
gggcagtcgatcaataccggcgaatcggaatacgtgattccggacgtgctggtgcgcaag
acgcagaacaaatggacggtcgagctcaacggcgacagcgtgccgcgtttgaagatcaat
cagcaatacgccgcgctgggcaacagcgcccgcagcgaagccgacggccagttcatccgc
agcaacctgcaggaagccaagtggctgattaaaagcctggagagccgcaatgagacgctg
ctgaaggtcacccgctgcatcgtcgatcaacagcaggcgttcttcgagcaaggcgaagag
tttatgaaacccatggtgctggcggatatcgcccaggccgtggagatgcatgaatcgacg
atctcgcgcgtcaccacgcagaagtttctgcacagcccgcgcggcattttcgaattgaaa
tatttcttctccagccacgtgaataccgacagcggcggcgaagcctcctcgacggcgatc
cgcgcgttggtgaagaaattgattgcggcggaaaaccccgccaaaccactcagcgacagc
aagctggccaccctgctcgccgatcaggggatcatcgtggcgaggcgcaccgtcgccaag
taccgagagtctttgtccatcccgccgtcgaaccagcgtaaacagttggtttga
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