Serratia marcescens WW4: SMWW4_v1c45390
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Entry
SMWW4_v1c45390 CDS
T02448
Name
(GenBank) hypothetical protein, DUF853 family
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c45390
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SMWW4_v1c45390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
SLFN-g3_helicase
FtsK_SpoIIIE
T2SSE
TrwB_AAD_bind
AAA_16
AAA_19
AAA_30
AAA_7
AAA_25
DEAD
AAA_28
nSTAND_NTPase5
SRP54
CbiA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGE20326
LinkDB
All DBs
Position
complement(4903168..4904694)
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AA seq
508 aa
AA seq
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MSEPRIIAKAMKDGKPEQDLVILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGVPVF
LSDVKGDLSGIGAEGVPSEKLQARLAAIGVTDWQPQACTIIPWDIYGEKGHPIRATISDL
GPLLLGRLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLRAMVQFVGDNAKQFQTQYGNI
SAASIGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLY
SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGV
GIYFVTQNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVKTAAQTLRANPAFDAETAITE
LGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGLNSAINKSPLYGRYEDMIDRE
SAYEKLSSGGFATIGTPQQGQQPQTQQQQQQAGGGLMDGLNELLFGSTGPRGGKRDGIVQ
TAAKSMARDLGRQILRGVLGSITGGRKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccacggattatcgccaaagcgatgaaagacggaaaaccggaacaggatctg
gtgattttgccggcgttggccaaccgccacggcttgatcaccggggcaaccggcaccggc
aagacggtgacgctgcagaaaatggccgaacagttctcacgcatcggcgtgccggtgttc
ctctcggacgtgaagggcgatctgtccggcatcggcgccgagggcgtgccttccgaaaaa
ctgcaggcgcgcctggcggcgattggcgtcaccgactggcaaccgcaggcctgcaccatt
atcccgtgggatatttacggtgaaaaaggccacccgatccgcgccaccatttccgatctc
gggccgttgctgctggggcgcctgttggatttgaacgaggtgcaaagcggcgtgctgcag
ctggtgttcaaaatcgccgatgacaatgcgctgctgctgctggacatgaaagacctgcgc
gccatggtgcagttcgtcggcgacaacgccaaacaattccaaacccagtacggcaatatc
tctgccgcctctatcggcgccatccagcgtggattgctgacgctggaagagcagggggcc
aaccagttcttcggcgagccgatgctggacatcaacgatctgatgaaaaccgacgccaac
ggccacggcgtgatcaatctgctggcggcggacaagctgatcaatcagccgaagctgtat
tcggtgttcctgctgtggctgctggccgagctgtttgagcacctgccggaagtgggcgac
cctgaacagccgaagctggtgttcttcttcgatgaggcgcacctgctgttcaacgatgcg
ccggcggcgctgctgaccaagattgaacaggtggtgcgtctgatccgctccaaaggcgtc
ggcatttacttcgtcacccagaacccgctggacatcccggacagcgtgctgggccagttg
ggcaaccgcgtgcagcatgcgctgcgcgcctttaccccgcgcgatcagaaggcggtgaag
acggcggcgcaaaccctgcgcgccaacccggccttcgatgccgaaacggcgatcaccgag
ctgggcgtgggcgaagcgctggtgtcattcctcgacgagaagggccggccgaacgtggtg
gagcgggcgatggtcatcgcgccggaatccaaaatgggcatgcttggcgcggaagggctg
aacagcgcgatcaacaagtcgccgctgtatggccgctatgaagacatgattgaccgcgag
tccgcctacgagaagctgtcgtcgggcggtttcgccaccatcggcaccccgcagcagggg
caacaaccgcagacgcaacagcaacaacagcaggcgggcggcggcctgatggatggtttg
aacgagctgttgttcggttccaccggcccgcgcggcggcaaacgcgacggcatcgtccag
accgccgccaagagcatggcgcgcgatctcggccgccagatcctgcgcggcgtgctgggc
tcgatcaccggcggccgtaaaaagtaa
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