Serratia marcescens WW4: SMWW4_v1c46760
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Entry
SMWW4_v1c46760 CDS
T02448
Symbol
gmr
Name
(GenBank) cyclic-di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
smw
Serratia marcescens WW4
Pathway
smw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMWW4_v1c46760 (gmr)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SMWW4_v1c46760 (gmr)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
GGDEF_2
PAS_10
Cas10-Cmr2_palm2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AGE20463
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All DBs
Position
5063662..5065656
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AA seq
664 aa
AA seq
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MPADQGPELLSAHFGTQSPHWRLAFDSNALELSAIKGKAHVAVALSAMEAAKIRRLTGVT
ASLELTITLAGEPLHLHLVGRRVNNLEWAGTASAFSDTQSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHEVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWVKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDL
ITGLPNRNAIQDKINHAITTRGEESFGLVYLDLDNFKKVNDAYGHMFGDRLLVEVALAIL
GCLSPDQVLARLGGDEFLVLAPQSDRERLQTLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDSLIRSADTAMYVAKEHGKRIYTVFSPEMNKRVAEYMWLDTNLRKGLEQNQ
LVLYYQPKIDAHSGEVHSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGQWVLQTAA
GQAAQWQERGLNLRVAVNLSARQLADDSIVNDLLGVLHRHRMAPCLLDFELTESSLIEDE
NRARALITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNFNPVSQSLV
RAIVAAAEALAFRVIAEGVETESENHFLDEVGVDEKQGFLFARPMLPEQLEHWLQSYRPR
SPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagaccaaggccctgagcttcttagcgctcacttcggcacccaaagcccccac
tggcggctggcgtttgacagcaatgccctggagctgtccgctattaagggcaaagctcat
gtcgcggtggcgctcagcgccatggaagcggcgaaaatccgccgtctgaccggcgtgacc
gccagccttgagctgaccattacgctagccggtgaaccgctgcatctgcatctggtcggg
cgccgcgtcaacaacctcgaatgggcgggcaccgcttccgccttcagcgacacccaatcc
gtggcgcgcgacctggtgcacggcctctccttcgccgagcaggtggtgtccgaagccaac
tcggtgatcgtgatcgtcgatcagcacggccgcatccagcgcttcaaccgactgagcgag
gagtacaccgggctgcacgaacacgaggtgatcggcaaaaacgttttccaactgtttatg
agcccggaagaagccgccgcttcgcggcgcaacatcgccggcttcttccgcaacggttcg
tcctatgaggtggaacgctgggtaaagacagtcaagggtgaacggctgttcctgtttcgc
aacaaattcgtgcacagcggcagcggaaaaaacgaagtctttctgatctgctccggtacc
gacatcaccgaagaacgtcgcgcgcaagagcggctacgggtgctggccaacaccgatctc
atcaccggcctgccgaaccgtaacgccatacaggacaagatcaatcacgccatcaccacg
cgcggtgaagagagtttcggcctggtgtacctcgatctcgacaacttcaaaaaggtcaac
gacgcctacggccatatgttcggcgatcggctgctggtcgaggtcgctctggcgatcctc
ggctgcctgagcccggatcaagtgctcgcccgcctcggcggcgacgaattcttggtgctg
gcgccacaaagcgatcgcgagcgcctgcaaacgctggcgcagcgcattatcgacaggctg
aagaccccttttcgcatcggcctgattgaggtgtataccggctgttcgatcggcatcgca
ctctgccctgagcacggcaacgatctcgacagcctgatccgcagcgccgataccgccatg
tacgtcgccaaggagcacggaaaacgcatctataccgtcttctcgccggagatgaacaaa
cgcgtcgccgagtacatgtggctggacaccaatctgcgcaaagggttggagcaaaatcag
ctggtgctgtattaccagcctaaaatcgacgcgcacagcggtgaagtgcacagcgtggaa
gcgttggtgcgctgggattcgccggagcgcggcctgatcccgccgctgcagttcatctcc
tacgccgaggagtccggcctgatcggcccgttgggccaatgggtgctgcaaaccgccgcc
gggcaggcggcgcagtggcaagagcggggattgaatctgcgggtggcggtcaacctctct
gcccgtcagctggccgatgacagcatcgtcaacgacctgctcggggtgctgcaccgtcac
cgcatggccccctgtctgctggacttcgagttgaccgaaagcagcctgattgaagacgag
aatcgcgcgcgcgcgctgatcacccggctgcgcgaactgggcgcgcaggtgcatcttgac
gactttggcaccggctattcgtcgttggcgcagctggcacgcattcctctggacgccatc
aagctggataaaagcttcgtgcgcggggtgaatttcaatccggtatcgcaatcgctggta
cgcgcgatcgtcgcggcggcggaggcgttggccttccgcgtgatcgccgaaggggtggag
accgagagcgaaaaccacttcctcgacgaagtcggcgtggacgaaaaacagggctttctg
ttcgcgcggccaatgctcccggaacagctggagcattggctgcagtcctatcgcccgcgc
tcaccctccgcatga
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