Serratia marcescens WW4: SMWW4_v1c46980
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Entry
SMWW4_v1c46980 CDS
T02448
Symbol
hdfR
Name
(GenBank) DNA-binding transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c46980 (hdfR)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMWW4_v1c46980 (hdfR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AGE20485
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Position
5090775..5091602
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AA seq
275 aa
AA seq
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MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGANLFTRHRNNIRLTPA
GERLLPYAESLMNTWQLAKKEVVRSLQHTELSIGATASLWEAYLTPWLQALYQQREALQL
EARVALRHSLVKQLHERQLDLLITTEPPKMDELASQQLSNFSLRLYSSAYRDKQAPMPYI
KLEWGADFHQQENRMLEGDNVPVLTTTSAHLTRQLLETTGGCAFLPSHWEKEYPQLVAAS
EIPPIIRPLYAVWLQNSDQQPLIRQLLKIPLNTAA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtggataccgaattactgaaaacctttttggaggtcagtagaacgcgtcactttggcaga
gccgcagaatctttgtacttaacgcagtccgcggtcagtttccgcatccgtcagttagaa
aaccagttaggcgcaaatttatttacccgtcatcgcaataacatccgcctgacgcctgcc
ggcgagcggcttctgccctatgccgagagcctgatgaacacctggcagttggcgaagaag
gaagtcgtgcgttcgctgcaacacaccgagttatcgatcggcgctaccgcttcgttgtgg
gaggcctatctgaccccctggttgcaagcactctatcaacaacgcgaggcgctgcagcta
gaagccagggtggcattaaggcactctttggtaaaacaactgcatgaaaggcagctcgat
ttactgatcaccactgaaccgccgaagatggatgaattggccagccagcaactgagcaat
ttctcattacgcctgtactcatccgcttatcgtgacaaacaggccccaatgccctacatc
aagctggaatggggagccgacttccaccaacaggaaaaccgcatgttggaaggtgataac
gtaccggtgcttaccaccacctccgctcacctgacgcgtcagctgttggaaaccacgggc
ggatgcgctttcctgcccagccattgggaaaaagagtacccacagctggtggccgccagc
gagatcccgccgattatccgcccactgtatgccgtctggttgcaaaacagcgatcaacag
cctttgattcgacaattacttaaaatacctttaaataccgcagcctaa
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