Serratia marcescens WW4: SMWW4_v1c47680
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Entry
SMWW4_v1c47680 CDS
T02448
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00540
Lipopolysaccharide biosynthesis
smw01100
Metabolic pathways
Module
smw_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SMWW4_v1c47680 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smw01005
]
SMWW4_v1c47680 (waaA)
Enzymes [BR:
smw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SMWW4_v1c47680 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SMWW4_v1c47680 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
SMWW4_v1c47680 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
SMWW4_v1c47680 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
smw01005
]
Lipid A
SMWW4_v1c47680 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
AGE20555
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All DBs
Position
5172033..5173310
Genome browser
AA seq
425 aa
AA seq
DB search
MLLRLYQVLLYLIQPLIWLRLLLRSRKAPAYRKRWAERYGFCAGKVVPGGIMLHSVSVGE
TLAAIPLVRALRHRYPALPITVTTMTPTGSERVQSAFGKDVHHVYLPYDLPGAMNRFLDQ
VNPKLVIIMETELWPNLINALHQRQIPLVIANARLSARSAAGYKKIGGFMRDMLRRITLI
AAQNQEDGDRFIELGLKRSQLAVTGSLKFDISVTPELAARAVTLRRQWAPRRPVWIATST
HDGEETILLEAHRKLLEKHPDLLLILVPRHPERFPTAKELVQKAGFSYTLRSSGEIPSGS
TQVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
KLSQAEGLITVTDVDSLVKEVATLLTDEDYRRYYGRHAVEVLYQNQGALQRLLQLLEPHL
PPRSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgtttatatcaggtactactctacctcatccaacccctgatctggctccgc
ttactgctgcgcagccgcaaagctccagcctaccgtaaacgctgggcggaacgctatggc
ttctgcgccgggaaagtcgtgccaggcggcatcatgctgcattccgtctccgtcggcgaa
acgctggcggccatcccgctggtgcgggcgctgcgccatcgttaccccgctttgccgata
actgtgaccacaatgaccccgacaggttcagaacgcgtccagtccgctttcggcaaagac
gtgcatcatgtctatctgccctacgatctgcccggcgccatgaaccgcttcctcgaccag
gtgaatcccaagctggtgatcatcatggaaaccgagctatggcctaacctgatcaacgcg
ctgcatcagcggcaaatccccctggtgatcgccaatgcacgcctgtcggcccgctccgcc
gccggctataagaaaattggcggattcatgcgcgatatgctgcgccgcatcacgctgatc
gccgcacagaaccaggaagatggcgatcggtttatcgaactgggcctgaaacgctctcag
ctggccgtcaccggcagcctgaaattcgatatctccgtcaccccggagctggccgcccgc
gccgttacattgcgccgccaatgggcgccgcgccgcccggtgtggatcgccaccagcacc
cacgacggtgaagagaccatcctgctggaagcgcaccgcaaactgctggaaaaacaccct
gacctgctgctgatcctggtaccgcgtcacccggaacgcttcccgaccgccaaagagctg
gtgcagaaggccggcttcagttacaccctgcgcagcagtggcgaaatcccgtccggcagc
acccaggtggtgatcggcgataccatgggcgaactgatgctgctgtacggcatcgccgat
ctggcctttgtcggcggcagcctggtggaacgcggcgggcacaacccgctggaagccgcc
gcgcacgccatcccggtgttgatgggcccgcatactttcaactttaaagacatctgcgcc
aagctttcgcaggccgaaggcctgatcaccgtgaccgacgtggattcgctggtgaaggaa
gtggcaaccctgctgaccgacgaagactaccgccgttactacggccgtcatgcggtggaa
gtgctgtatcagaatcagggagcgttgcagcgcctgctgcagctgctggaaccgcacctg
ccgccccggagtcactga
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