Serratia marcescens WW4: SMWW4_v1c48140
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Entry
SMWW4_v1c48140 CDS
T02448
Symbol
rbsR
Name
(GenBank) DNA-binding transcriptional repressor of ribose metabolism
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c48140 (rbsR)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SMWW4_v1c48140 (rbsR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_38
HTH_3
HTH_Tnp_ISL3
Rad10
Motif
Other DBs
NCBI-ProteinID:
AGE20601
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All DBs
Position
complement(5225083..5226075)
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AA seq
330 aa
AA seq
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MKDVARLAGVSTSTVSHVVNNNRFVSDSVRDKVMAAVEQLNYAPSALARSLKLNQTRTIG
MLVTASNNPFYAEVVRGVERSCYERGYSLILCNTEEDAARMNRSMETLLQKRVDGLLLMC
TENHRPSQDALSRYPSLPIVMMDWAPFEGANDIIQDNSLLGGEMATDHLIARGYRKIACI
AGPQDKTTARHRLEGYRNAMRRAGLPVPTGYEVHCDFEFEGGVNAMRQLLALDEPPHAVF
AGNDAVAVGVYQALYQAGLSVPQDMAVMGYDDIELARYLAPPLSTIHQPKDSLGELAIDA
LINRLQNPERAPQVLVLTPELVERASVGRR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtcgcccgcctggcgggcgtttcaacctctaccgtttcgcatgtggtcaac
aacaatcgctttgtcagcgacagcgtgcgcgacaaggtcatggcggccgtggaacagttg
aactatgcgccttctgcgctggcgcgcagcctgaagcttaatcagacccgcaccatcggc
atgctggtgaccgccagcaacaacccgttttatgctgaagtggtgcgcggcgtggagcgc
agctgctatgaacgtggctacagtctgatcctgtgcaataccgaagaagacgccgcgcgc
atgaaccgcagcatggagacgctgctgcaaaagcgcgtcgacggtttgctgttgatgtgc
accgaaaaccaccggccatcgcaagatgccctgagccgctacccgtcattgccgatcgtg
atgatggactgggcgccgttcgagggcgcgaacgatattattcaggataactcgctgctg
ggcggcgagatggcgaccgatcatctgatcgcccgcggctaccgcaagatcgcctgcatc
gccggcccgcaggataaaaccaccgcccgtcaccggctggaaggctatcgcaacgcgatg
cgtcgcgccggattaccggttccgacagggtatgaagtgcattgcgactttgagtttgag
ggcggcgtgaacgccatgcgccaactgttggcgctggacgaaccgccgcatgcggtgttc
gccggcaacgacgcggtggcggtaggcgtttatcaggcgctgtatcaggccgggctttcc
gtgccgcaggatatggcggtgatggggtacgatgatattgagctggcgcgttatctggcg
ccgccgctgagcaccattcatcaaccgaaggattcgttgggcgagctggcgatcgatgcg
ctgatcaaccgcctgcaaaacccggagcgcgcgccccaggtgctggtgctgacgcccgag
ctggtggaacgcgcttcggtgggccgccgttaa
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