Sinorhizobium meliloti SM11: SM11_chr0124
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Entry
SM11_chr0124 CDS
T01885
Symbol
fadD
Name
(GenBank) FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00061
Fatty acid biosynthesis
smx00071
Fatty acid degradation
smx01100
Metabolic pathways
smx01212
Fatty acid metabolism
smx02024
Quorum sensing
smx04146
Peroxisome
Module
smx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SM11_chr0124 (fadD)
00071 Fatty acid degradation
SM11_chr0124 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SM11_chr0124 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM11_chr0124 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smx01004
]
SM11_chr0124 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smx04147
]
SM11_chr0124 (fadD)
Enzymes [BR:
smx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SM11_chr0124 (fadD)
Lipid biosynthesis proteins [BR:
smx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SM11_chr0124 (fadD)
Exosome [BR:
smx04147
]
Exosomal proteins
Exosomal proteins of breast milk
SM11_chr0124 (fadD)
Exosomal proteins of breast cancer cells
SM11_chr0124 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEH77411
UniProt:
F7X6K5
LinkDB
All DBs
Position
complement(133395..135095)
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AA seq
566 aa
AA seq
DB search
MAEASTQQAGSSTAKIWLGSYPPGVPAEIGPLTYRSIGEFFDHAVAQYSWRPAFTCMGKA
LTFSDLNTHSAKIGAWLQSLGLAKGDRVAVMMPNILQNPVIVYGILRAGFTVVNVNPLYT
PRELEHQLVDAGAKAIFVLENFAHTVEQVLARTEVKHVVVASMGDMLGAKGAIVNLVVRR
VKKLVPAWSIPGHLSFKTVLAKGATLGFKRPNVAPGDVAFLQYTGGTTGVSKGATLTHAN
LLSNMAQMELWLNTAFLRKPRPESLTFMCALPLYHIFALTVNSLMGLATGGNNILIPNPR
DIPAFVKELGRYRTNIFPGLNTLFNALMNNSEFRKLDFSSLILTFGGGMAVQRPVAERWL
ELTGCPIHEGYGLSETSPVATANRLDTDDFTGTIGIPLPSTEVEIRDEDGRTLPVGEIGE
ICIRGPQVMAGYWQRPEETARAISPDGFFRTGDVGFMNAEGLTKIVDRKKDMILVSGFNV
FPNEIEEVAATHPGILECAAIGVADPHSGEAVKLFVVRKDPNLTEEEVKRHCAASLTNYK
RPRYVEFRTELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcaagcacgcaacaggcgggctccagcacggcgaagatttggcttggatcc
tacccgccgggcgtgccggccgaaatcggcccgctcacctatcgatccatcggcgaattc
ttcgatcacgcggttgcgcaatattcctggcgccccgcattcacctgcatgggcaaggca
ctgaccttctccgatctcaatacgcattcggcgaaaatcggcgcctggctgcagtcgctg
gggctcgcgaagggcgatcgggttgcggtgatgatgcccaacatccttcaaaatccggtc
atcgtctatgggatcctgcgagccggcttcaccgtcgtcaacgtcaatccgctctatacg
ccgcgcgaactggagcaccagttggtggatgccggcgccaaggcgatcttcgtgcttgag
aatttcgctcatacggtcgagcaggtgctggcccgcacggaggtcaagcatgtcgtggtc
gccagcatgggcgacatgcttggtgcgaagggggcaatcgtcaatctggtggtgcgccgc
gtcaagaagctcgtccccgcctggtcgattccaggtcacctttcgttcaagacggttctt
gccaagggcgcgacgctcggcttcaagcgcccgaacgtagcgccgggagatgtcgccttc
ctgcaatatacgggcggcaccaccggtgtttccaagggcgcaacgctgacgcacgccaat
ctcctgtccaacatggcccagatggagctgtggctgaacacggccttcctgcgcaagccg
cgcccggagagcctcaccttcatgtgcgcgcttccgctctaccatatcttcgcgctcacg
gtgaattcgctgatgggactggcaaccggcggcaacaacatcctgataccgaacccgcgc
gacatccccgccttcgtcaaggagctcggcaggtacaggacgaacatctttccggggctg
aacacgctcttcaacgcgttgatgaacaattccgaattccgcaaactcgacttctcttcc
ctgatcctgaccttcggcggcggcatggcggtgcagcggccggtcgccgagcgctggctg
gagctgaccggctgcccgatccatgagggctacggactttccgagacgtcgccggtcgcc
accgccaaccgcctcgacaccgacgatttcaccggcacgatcggcataccgctgccctcg
acggaggtcgagatccgcgacgaggacgggcgcacgcttcccgtcggcgaaatcggtgag
atctgcattcgcgggccgcaggtgatggcgggttactggcagcgccccgaggaaacggcc
agggccatttcgccggacggcttcttccgcaccggggatgtcggcttcatgaacgccgag
ggactgacgaagatcgtcgatcggaagaaggacatgatcctcgtctcgggattcaacgtg
ttccccaacgagatcgaggaagtggcggcgacccatcccggcatcctcgaatgcgccgca
atcggcgttgccgacccgcattccggcgaggcggtcaagctcttcgtcgtgcgcaaggac
ccgaacctcaccgaagaagaggtcaagcgccactgtgccgccagcctcaccaactacaag
cggccgcgatacgtggaattccgcaccgaactgcccaagtcgaacgtcggcaagatcctg
cgcaaggacctgcgcggatag
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