Sinorhizobium meliloti SM11: SM11_chr0159
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Entry
SM11_chr0159 CDS
T01885
Symbol
fadB
Name
(GenBank) putative fatty oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00071
Fatty acid degradation
smx00280
Valine, leucine and isoleucine degradation
smx00310
Lysine degradation
smx00362
Benzoate degradation
smx00380
Tryptophan metabolism
smx00410
beta-Alanine metabolism
smx00640
Propanoate metabolism
smx00650
Butanoate metabolism
smx00907
Pinene, camphor and geraniol degradation
smx00930
Caprolactam degradation
smx01100
Metabolic pathways
smx01110
Biosynthesis of secondary metabolites
smx01120
Microbial metabolism in diverse environments
smx01200
Carbon metabolism
smx01212
Fatty acid metabolism
Module
smx_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SM11_chr0159 (fadB)
00650 Butanoate metabolism
SM11_chr0159 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SM11_chr0159 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SM11_chr0159 (fadB)
00310 Lysine degradation
SM11_chr0159 (fadB)
00380 Tryptophan metabolism
SM11_chr0159 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SM11_chr0159 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SM11_chr0159 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SM11_chr0159 (fadB)
00930 Caprolactam degradation
SM11_chr0159 (fadB)
Enzymes [BR:
smx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SM11_chr0159 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SM11_chr0159 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SM11_chr0159 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_binding_8
FAD_binding_3
Pyr_redox
F420_oxidored
ApbA
Shikimate_DH
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AEH77444
UniProt:
F7X743
LinkDB
All DBs
Position
complement(167948..170161)
Genome browser
AA seq
737 aa
AA seq
DB search
MSYTNFKIETDADGIALVTWDMPDKSMNVFTEEVMKELDAIIDQTTADPAVKGVVITSGK
SSFSGGADLSMIKSMFTFQAEERKKDPDNAARKLFDLVGRMTGLFRKLETSGKPWVSAIN
GTCMGGAFEMSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVPRLTNTQDALQMMT
TGSSLTPARAKAMGLVHEVVDPDKLIEAAKAMIKNGLKPVQPWDEKGFKLPGGGIWTPAS
AQLWPAASGILRRETYGNYPGAIAILKCVYEGLQVPFDTALKIEQRYFTEILQTTEAFSM
IRSLFVSMQELGKGARRPAGVPKTELKKVGVVGAGFMGASIAYVTAAGGIPVTLIDRDME
AAEKGKTHSEGLVKDAIGKGRLTKEEGEALLSRITPSADYGDLRDAGLVIEAVFEDRQVK
KDVIEKVEAVIAEDAIFASNTSTLPITGLARNSKRPDRFIGIHFFSPVEKMMLTEVILGK
ETGDRALAAALDYVAAIRKTPIVVNDTRGFYVNRCVFRYIHEAYDMLIEGVPPAMIENAA
KMAGMPVGPLSLNDEVAIDLSQKILKAAVADLGDKAVDPRHMALIDKMVDELDRRGRKNG
KGFYEYPAKPARKYLWPGLKELYPQKDAGEIEVGVLKQRLLVTIALEAARTIEEGIVTDP
READVGSILGFGFAPYTGGTLSYIDGMGAKAFVELCEKLAADHGDHFRPTPLLKEMAEKG
ETFYGRFDPYGAGQKAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacacgaacttcaagatcgaaaccgacgccgacggcattgcgctggtcacctgg
gacatgcccgacaagtcgatgaacgtcttcaccgaagaggtgatgaaggaactcgacgcc
attatcgatcagacgaccgcagatcctgccgtcaagggcgtggtcatcacctccggcaaa
tcctccttctccgggggtgccgacctttcgatgatcaagtcgatgttcaccttccaggcc
gaggaaaggaagaaggacccggacaacgcggcccggaaactcttcgacctcgtgggccgg
atgacgggtctcttccgcaagctcgaaacctcgggcaagccctgggtgtcggccatcaac
ggcacctgcatgggcggcgccttcgagatgtcgctcgcctgccacggccgtgtcgcctcc
aatgcgaaatcggtgaagatcgcgcttcccgaggtcaaggtcggcattttcccgggcgcc
ggcggcacccagcgcgttccgcggctgaccaatacgcaggacgcgctgcagatgatgacg
accggctcctcgctcacgccggcgcgggcaaaggccatggggctcgtccacgaggtggtc
gatccggacaagctgatcgaggctgccaaggcgatgatcaagaacggcctgaagccggtt
cagccctgggacgagaagggcttcaagctgccgggcggcggcatctggacgcccgcctcc
gcgcagctctggccggccgcctccggcatcctgcgccgcgagacctacggcaattacccc
ggcgcgatcgcgatcctgaaatgcgtctatgaggggctgcaggttcccttcgatacggct
ttgaagatcgagcagcgctatttcaccgaaatcctgcagacgaccgaagccttctcgatg
atccggtcgctgttcgtctcgatgcaggaactcggtaagggcgcgcgccggccggccggt
gtaccgaagaccgagctcaagaaagtcggcgtcgtcggcgccggtttcatgggcgcctcg
atcgcctatgtaaccgcggcgggcggcatccccgtcaccctcatcgaccgcgacatggaa
gctgccgaaaagggcaagacgcattcggaaggcctggtcaaggacgcgatcggtaaggga
cgcttgaccaaggaggaaggcgaagcgctgctttcgcgcatcacaccttcggcggactat
ggcgatctcagggatgccggcctcgtcatcgaggcggtcttcgaggaccggcaggtcaag
aaggacgtgatcgagaaggtcgaagcggtgatcgccgaggacgcgatcttcgcctccaac
acctcgacgctgccgatcaccggcctcgccaggaattccaaacgcccggaccggttcatc
ggcattcatttcttctcgccggtcgagaaaatgatgctgaccgaggtgatcctcggcaag
gagaccggagaccgtgcgctcgcggccgcgctcgactatgtcgcggcgatcaggaagacg
ccgatcgtcgtcaacgacacgcgcggcttctacgtcaatcgctgcgtcttccgctatatc
cacgaagcctatgacatgctgatcgagggcgtaccgccggcgatgatcgagaacgccgcc
aagatggccggcatgccggtcggaccgctgtcgctcaacgacgaggtggcgatcgacctc
agccagaagatcctgaaggcggccgttgccgatctcggcgacaaggccgtcgatcccagg
cacatggcgctgatcgacaagatggtcgacgagctcgaccggcgcggccgcaagaacggc
aagggtttctacgagtatccggcaaagccggccaggaaatatctctggccgggcctgaag
gagctctacccgcagaaggatgccggcgagatcgaggtcggtgtgctcaagcagcgcctg
ctcgtgacgatcgcactcgaagccgcgcgtacgatcgaggagggcatcgtcaccgacccg
cgcgaagccgatgtcggctcgatcctcggcttcggctttgcgccctacaccggcggcacg
ctctcctacatcgacggcatgggtgcgaaagccttcgtcgagctttgcgaaaagctcgcc
gcggaccatggcgaccacttccggccgacgccgcttttgaaggagatggcggaaaagggc
gaaaccttctacgggcgcttcgacccgtatggcgcggggcagaaggcggcataa
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