Sinorhizobium meliloti SM11: SM11_chr1174
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Entry
SM11_chr1174 CDS
T01885
Symbol
uvrD1
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx03420
Nucleotide excision repair
smx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SM11_chr1174 (uvrD1)
03430 Mismatch repair
SM11_chr1174 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smx03400
]
SM11_chr1174 (uvrD1)
Enzymes [BR:
smx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM11_chr1174 (uvrD1)
DNA repair and recombination proteins [BR:
smx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM11_chr1174 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
SM11_chr1174 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEH78451
UniProt:
F7X458
LinkDB
All DBs
Position
complement(1205590..1208163)
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AA seq
857 aa
AA seq
DB search
MTKGFDDIPFFDEEPAPRKPAAADGGIAARAMAARDKAQRPDYVSGLNPEQREAVEALEG
PVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKAAREMKERIGVLVGHAVE
GMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQF
AGMIDTWKNKGLDPSQIPEGDARAFANGKGRELYAAYQNRLLTLNACDFGDLLLHPIRMF
RANPDVLKEYHAKFRYILVDEYQDTNTAQYMWLRLLAQQTQASRNRPSSGLPATFSPSDG
EKGQAARSQSPLSPSERGEGRGEGQPTVNICCVGDDDQSIYGWRGAEVDNILRFEKDFPG
AKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKTLFTERTNPDDEKVHVHAAWDSEEEAR
AIGEEIEQLQRKKHNLNDISILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDA
MAYFRLVCQPADDLAFERIVNTPKRGLGETTVRTLHDYARARDIPMLAAASDIVETDELK
PKARKGLFDVVADFRRWQTLLETTPHTELAERILDESGYTAMWQADKSAEAPGRLENLKE
LIRSMEAFESMRGFLEHVALVMDAEQNENMDAVSIMTLHSAKGLEFDTVFLPGWEEGLFP
HQRALDEGGRAGLEEERRLAYVGITRAKRRCHIWFVSNRRIHGLWQSTLPSRFLDELPIA
HVEVAEQEVSYGGYGRGGYGQSRFDKADPFENNYQTPGWKRAQQHRSEATRDNWGTRSGH
AIERIGYGESGPRTRTIEGELVAKSTSAEPSRFNVGDRVFHIKFGNGNIAAIEGNKLTID
FDRAGQKRVLDGFVERV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggttttgacgatattccctttttcgacgaggagcccgcgccgcggaaaccc
gcggccgccgacggcggcatcgccgcgcgcgccatggccgcccgcgacaaggcccagcga
ccggactatgtctccgggctcaatccggagcaacgggaggcagtcgaggcgctggaaggt
ccggtactcgtgctcgccggcgccggcaccggcaagacgcgcgttctgacgacgcggatc
gcccatatcctttcgaccggccgcgcctatccctcgcagatcctcgccgtcaccttcacc
aacaaggcggcgcgggaaatgaaggagcgcatcggcgtgctcgtcggccacgccgtcgaa
ggcatgccctggctcggcaccttccactcgatcggggtcaagctcctccgccgccatgcc
gagctggtgggcctgcggtccgacttcaccatcctcgacaccgacgacgtcgttcgcctc
atcaagcagctcatccaggcggagggtctcgacgacaagcgctggccggccaagcagttc
gccggcatgatcgacacctggaagaacaagggcctggacccgtcgcaaatcccggaaggc
gatgcccgcgcttttgccaacggcaagggccgcgagctctatgccgcctaccagaaccgg
ctgctgaccctgaatgcctgcgatttcggcgacctgctgctgcatccgatccgcatgttc
cgcgccaatccggacgtgctgaaggagtatcacgccaagttccgttacatcctcgtcgac
gagtaccaggacaccaacacggcgcaatatatgtggctgaggctgctggcccagcagacg
caagcgtcgcgaaatcgcccctcatccggcctgccggccaccttctccccgtccgacggg
gagaagggacaagcggcgcgttcgcaatcccccctctccccgtcagaacggggagagggc
cggggtgaggggcaacccaccgtcaacatctgctgcgtcggcgacgacgaccagtcgatc
tacggctggcgcggcgccgaggtggacaacattctccgcttcgagaaggatttccccggc
gccaaggtcatcaagctggagcgcaactaccgctcgaccgagcatatcctcggcgcggcg
gcgcatctgattgcccataacgagggccggctcggcaagacgctctttaccgagcgcacg
aatcccgacgacgagaaggtgcatgttcatgccgcctgggactccgaggaggaggctcgc
gcgatcggcgaagagatcgagcagctccagcgcaagaagcacaatctgaacgacatatcg
atcctcgtgcgcgcctctttccagatgcgcgaattcgaagaccgcttcgtcacgctcggc
ctcaactatcgcgtcatcggcggccctcgcttctatgagcggctcgaaatccgcgatgcc
atggcctatttccgcctcgtctgccagcccgccgacgacctcgccttcgagcggatcgtc
aacacgccgaagcgcggcctcggcgagacgaccgtccgcaccctgcacgactatgcccgg
gcccgcgacatcccgatgctggccgcggcaagcgacatcgtcgagacggacgaattgaag
ccgaaggctcgcaagggcctcttcgacgtcgtcgccgatttccgccgctggcagacattg
ctcgaaacgacgccgcacaccgaacttgcagagcggatcctcgacgagagcggctatacc
gccatgtggcaggccgacaaatcggcggaagcgcccgggcgcctcgaaaacctgaaggag
ctcattcgttcgatggaagccttcgagtccatgcgcggctttctcgagcacgtcgcgctg
gtgatggacgccgagcagaacgagaatatggatgccgtctccatcatgacgctgcattcg
gccaaggggctggaattcgacaccgtcttcctgccggggtgggaggaagggctcttcccg
catcagcgcgccctggatgaaggcggccgcgcaggtctggaggaggagcgccgcctcgcc
tatgtcggcatcacccgtgccaagcgccgctgtcatatctggttcgtttcgaaccgccgc
atccacggcctctggcaatcgacgcttccctcgcgcttcctcgacgagttgccgatcgct
catgtggaagtggccgaacaggaggtctcctatggcggttacggtcgcggcggttacggc
cagtcgcgcttcgacaaggccgatcccttcgagaacaattaccagacgcccggctggaaa
cgcgcccagcagcaccggtcggaggccacccgagacaactggggcacccgctccggccac
gccatcgaacgcatcggttacggcgaatcgggcccccgcacccgcaccatcgaaggcgag
ctcgtcgccaagtcgacgagcgccgagccctcccgcttcaatgtcggcgaccgggtcttc
cacatcaagttcggcaacggcaacatcgcggcgatcgagggcaacaagctgacgatcgat
ttcgaccgcgccgggcagaagcgcgtgctggatgggttcgtagaacgggtgtga
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