Sinorhizobium meliloti SM11: SM11_chr1954
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Entry
SM11_chr1954 CDS
T01885
Symbol
rlpA
Name
(GenBank) putative rare lipoprotein A precursor
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smx01011
]
SM11_chr1954 (rlpA)
Enzymes [BR:
smx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SM11_chr1954 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SM11_chr1954 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
AEH79217
UniProt:
F7X070
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All DBs
Position
1925081..1926121
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AA seq
346 aa
AA seq
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MTSNNGAAYLVRGLRLAAVPLLCAVLAACGSTSSVKKTKSRSKEYFAESVYGVKASPRVA
TGNNIPKGGGRYQVGKPYQVKGRWYQPKEDFGYNKSGMASWYGSAFHGRLTANGEVYDKH
HLSAAHPTFPLPSYARVTNLENGTSVIVRVNDRGPYEYGRIIDVSSKTADLLDIKRKGSA
NVRVQYVGRAPLEGNDMPSLMASYVRKGDRGPSVMPEGQIASGVMVASNEPLRDMVPNLR
AVPVPNKSMLDAGVPVNALAKPAQAPAATSAFGEFVVLPQIGPMPTSRPQLIPLPDGSMA
YAAAYVEVRVSDKPSPFEAIMVDRNPLTPDSILAYAKRQHRNADSR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaataacggtgcggcatatcttgtgagggggctccgtctcgcagcggttccg
ttgctttgcgcggtgcttgcggcctgcggatcgacatcgagcgtcaagaagaccaagtcg
cggagcaaggaatacttcgcggagtccgtttatggcgtcaaagccagtcccagggtcgct
accggaaacaacattccgaagggcggcggccgctaccaggtaggcaagccctatcaggtc
aagggcaggtggtatcagccgaaggaggatttcggctacaacaagagcgggatggcctcc
tggtacgggtcggccttccatggccgtctgacggcaaatggcgaggtctacgacaagcat
cacctttcggccgctcacccgacctttccgctgccgagctatgcgcgcgtgaccaacctg
gagaacggcacgtctgtcatcgtgcgtgtcaacgatcgcggcccctatgaatacggccgg
atcatcgacgtctcttcgaagaccgccgatctgctggacatcaagcgcaagggcagcgcc
aatgtccgcgttcaatatgtcggccgtgcgccgctcgaaggcaatgacatgccctccctc
atggcttcgtacgtcaggaagggcgaccgtggcccgagcgtgatgccggaagggcagatc
gcctcaggcgtgatggtggcttccaacgagccgctgcgcgacatggttccgaatctccgc
gccgtcccggttccgaataaatcgatgctcgatgccggcgtgccggtgaacgcgctcgcc
aaaccggcgcaggccccggcggcaacaagcgccttcggcgaattcgtcgttctgccgcag
atagggcccatgccgacgtcgcgcccgcaattgatcccgctgccggacggcagcatggcc
tatgccgcggcatatgtcgaagtccgcgtcagcgacaagccttcgcccttcgaggcgatc
atggtcgatcgcaatccgctgacacccgattccatcctcgcctatgcgaagcgccagcac
cgaaacgccgactcgcgctga
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