Sinorhizobium meliloti SM11: SM11_chr1955
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Entry
SM11_chr1955 CDS
T01885
Symbol
dac
Name
(GenBank) putative penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00550
Peptidoglycan biosynthesis
smx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SM11_chr1955 (dac)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smx01002
]
SM11_chr1955 (dac)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smx01011
]
SM11_chr1955 (dac)
Enzymes [BR:
smx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SM11_chr1955 (dac)
Peptidases and inhibitors [BR:
smx01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SM11_chr1955 (dac)
Peptidoglycan biosynthesis and degradation proteins [BR:
smx01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SM11_chr1955 (dac)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AEH79218
UniProt:
F7X071
LinkDB
All DBs
Position
1926178..1927332
Genome browser
AA seq
384 aa
AA seq
DB search
MRMKWLAVVGFLAAVVSGQAVAQTPAFDTKAKQIYLVDAETGTVLFSRDEDAPVPPASLA
KLMAMEVVFEALDKGELTPETSFEVSEHAWRTGGAPSGTSTMFAAIKSRIRVADLIQGAT
VQLANDACIVLAEGMAGSEAAFAELMTKRARDLGLPVATFKNATGLPHPENKVTMRELVA
LTRHLYEAHPDYYRLYSQPEFEWNKILQRNKNPLIAANVGVDGLATGFAEGFGFSLAVSM
QRGDRRVYLAMGGLESEKERIEESRRVLDWAMTAFEKRRIFADGETIGEASVYGGADSRV
ALVAGSPVDVLLPVKNPERLTARIVYKWPLNAPVAAGQQVGVVKLWNGDKLLREVPVKTA
RAVEPGTLTSRAIDALQELLFFWL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgaagtggcttgcggtcgtaggtttcctcgcggccgtcgtttcggggcaagcg
gtcgcccagacgcccgccttcgacaccaaagcgaagcagatatatctcgtcgatgccgag
acgggcacggtgctgttttcacgcgacgaggatgcacccgtcccgcctgcctcgctcgcc
aagctcatggcgatggaggtggttttcgaggccctggacaagggcgaactgacgcccgag
acgagtttcgaggtttctgaacacgcgtggcgtacaggcggggccccctccggcacgtca
acgatgttcgccgcgatcaaatccaggatccgcgttgcggacctcatccagggcgcaacg
gtgcagctcgcgaacgacgcatgcattgtcctggctgagggaatggctggcagcgaggct
gcttttgccgaactgatgaccaagcgggcacgcgatctcgggctgccggtcgccaccttc
aagaatgccacggggctgccgcatcccgaaaacaaggtcacgatgcgcgaactcgtcgcc
cttacgcggcacctatacgaggcgcacccggattactaccggctctattcgcagccggaa
ttcgagtggaacaagatccttcagcgcaacaagaaccctctgatcgccgcgaatgtcggc
gtcgatgggttggcgaccggctttgcggagggtttcggcttctcgctcgccgtctcgatg
caacgcggcgaccgccgcgtctatctcgcgatggggggcctcgagagtgaaaaggagagg
atcgaggagagccgcagggtcctggattgggcgatgaccgctttcgagaaacggcgcatc
ttcgccgatggtgaaaccatcggagaggcgagcgtctacggcggtgcggattcccgagtg
gcgctcgtggcgggcagcccggtcgacgttctgctgccggtcaaaaatcctgaacggctg
acggcacgcatcgtctacaaatggccgctcaacgcacccgtcgctgccggtcagcaggtc
ggcgtcgtcaagctctggaacggggacaagctgctgcgggaagttcccgtgaagacggcg
agggcggtcgagcccgggacgctcacgagccgggcgatcgacgcgctgcaggaactgctg
ttcttctggctgtga
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