Sinorhizobium meliloti SM11: SM11_chr1989
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Entry
SM11_chr1989 CDS
T01885
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00220
Arginine biosynthesis
smx00240
Pyrimidine metabolism
smx00250
Alanine, aspartate and glutamate metabolism
smx01100
Metabolic pathways
smx01110
Biosynthesis of secondary metabolites
smx01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SM11_chr1989 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SM11_chr1989 (carB)
00220 Arginine biosynthesis
SM11_chr1989 (carB)
Enzymes [BR:
smx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SM11_chr1989 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AEH79252
UniProt:
F7X0A5
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Position
1958053..1961436
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AA seq
1127 aa
AA seq
DB search
MKEEGYRVILVNSNPATIMTDPGLADATYVEPITPEVVAKIIAKERPDALLPTMGGQTAL
NTALSLRRMGVLDRYNVEMIGAKPEAIDKAEDRALFREAMAHIGLETPKSRLANATDIKD
HDRKSHEAERSALKAKLSGDELDKALDELENQWNLGEGDRKQRYVNHAMAIAAQALDDVG
LPAIIRPSFTLGGTGGGIAYNRSEFFEIVGSGLDASPTTEVLIEESVLGWKEYEMEVVRD
KADNCIIICSIENIDPMGVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSN
VQFAVNPENGRLVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELENDITGGA
TPASFEPSIDYVVTKIPRFAFEKFPGAEPTLTTAMKSVGEVMAIGRTFAESLQKALRGLE
TGLTGLDEIEVPDFDDNGDGRNAIRAALGTPTPDRLRMVAQALRLGMSEAEVHEACKIDP
WFIAQFKAIVDMEARIREHGLPADAENLRMLKAMGFSDARLATLTGKRPKEVAELRNALN
VRPVYKRIDTCAAEFASPTAYMYSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGI
EFDYCCCHAAFALKDAGYEAIMINCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEN
GTLHGVIVQFGGQTPLKLAEALEKNGIPILGTAPDAIDLAEDRDRFQKLLMKLDLNQPNN
GIAYSVEQARLVAGEIGFPLVVRPSYVLGGRAMQIIHSESMLQSYLLDTVPGLVPEDIKQ
RYPNDKTGQINTLLGKNPLLFDSYLTNAIEVDVDCLCDGKDVFVSGIMEHIEEAGIHSGD
SACSLPVHSLGTDMVDELERQTGALARALNVGGLMNVQFAIKDGTIYVLEVNPRASRTVP
FVAKTIGAPIAKIAARVMAGEMLDEAIAAYGKKPNPRNLKHIAVKEAVFPFARFPGVDTL
LGPEMRSTGEVIGLDTDYALAFAKSQLGAGVDLPRDGTVFVSVRDEDKERVLPAIRILSD
IGFKVMATGGTARFLGEQGIVATKINKVLEGRPHVEDAIRNRQVQLVINTTDGNKAISDS
KSLRRATLMQKVPYYTTMAGAEAAALAIKALKAGNLEVRPLQSYFET
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaggaaggctaccgcgtcatcctggtcaactccaacccggcgacgatcatgacc
gatccgggtctggcggacgcgacctatgtcgaaccgatcacgccagaggtcgtcgccaag
atcatcgccaaggaacgccccgacgcgctgctgccgaccatgggcggacagacggcgctc
aacacggccctgtcgctgcgccgcatgggcgtgctcgaccgctacaatgtcgagatgatc
ggtgcgaagcccgaggcgatcgacaaggcggaagaccgcgccctgttccgcgaggccatg
gcgcatatcggcctcgagacgcccaagtcgcgtctggcgaacgccacggacatcaaggac
cacgaccgcaagtcgcacgaggcggagcgctcagcgctcaaggcgaagctttccggtgac
gaactcgacaaggcgctggacgaactcgaaaaccagtggaacctcggcgaaggcgatcgc
aagcagcgctatgtgaaccacgccatggcgatcgccgcacaggcgctcgacgatgtgggc
ctccccgcgatcatccggccgtccttcacgctcggcggcaccgggggcggcatcgcctat
aaccgttcggagttcttcgagatcgtcggcagcggtctcgacgcgtcgccgacgacggaa
gtcctgatcgaggaatcggtcctcggctggaaggaatatgaaatggaggtcgtccgcgac
aaggcggacaactgcatcatcatctgctcgatcgagaacatcgatccgatgggcgtccac
acgggcgattcgatcaccgttgcgccggcactgaccttgaccgacaaggaatatcagatc
atgcgcaacgcctcgatcgcggtgctgcgcgagatcggcgtcgaaacgggcggctcgaac
gtccagttcgccgtcaatcccgagaatggccgcctcgtcgtcatcgagatgaacccgcgc
gtctcgcgctcctccgcactcgcatcgaaggccaccggcttcccgattgccaagatcgcc
gccaagctcgcagtcggctatacgctcgacgaactcgaaaacgatatcaccggcggcgcg
acgcctgcatccttcgagccttcgatcgactacgtcgtcaccaagatcccgcgcttcgcc
ttcgagaaattcccgggagccgagccgacgctcacgaccgcaatgaagtcggtgggcgaa
gtcatggcgatcggccggaccttcgccgaatcgctgcagaaggcgctgcgcggtctcgag
accggactgaccggacttgacgagatcgaggtgcctgatttcgacgacaatggcgacggc
cgcaatgccatccgcgccgcgctcggcacgccgacgccggaccgcctgcgcatggtcgca
caggcgctgcgtctcggcatgagcgaagccgaagtgcatgaagcctgcaagatcgacccc
tggttcattgcccagttcaaggcgatcgtcgacatggaggcgcgcatccgcgagcacggc
ctgcccgccgacgccgagaacctgcgcatgctgaaggcaatgggcttctccgacgcccgg
cttgcgacgcttaccggcaagcgtccgaaagaggtggccgagctccgcaacgcactgaac
gtgcgccccgtctacaagcgcatcgacacctgcgcggccgagttcgcatcgccgaccgct
tacatgtattcgacctatgagacgcctttcgtcggtgccgcccggtcggaggcgcaggtt
tccgaccggaaaaaggtcgtcatcctcggcggcggcccgaaccggatcggccagggcatc
gaattcgactactgctgctgccatgccgccttcgcactgaaggacgccggctacgaagcg
atcatgatcaactgcaacccggagacggtttcgaccgactacgacacctccgaccggctc
tatttcgagcccctgacggcagaggatgtgatcgagatcatgcgtgccgaacaggaaaac
ggcacgttgcatggcgtcattgtccagttcggcggccagactccgctgaagcttgccgaa
gcgctggaaaagaacggcatcccgatcctcggcaccgcgccggacgcgatcgatctcgcc
gaggaccgtgatcgcttccagaagctcctgatgaagctcgatctcaaccagccgaacaac
ggcattgcctactccgtcgagcaggcccgcctcgttgccggcgaaatcggcttcccgctg
gtcgtgcgcccgtcctatgttctcggcggccgcgccatgcagatcatccattcggaaagc
atgctgcagagctatttgctcgacaccgttccggggctggttcctgaagatatcaagcag
cgctatccgaacgacaagaccggccagatcaacaccttgctcggcaagaacccgctcctc
ttcgacagctacctgacgaatgcgatcgaagtggacgtcgattgcctttgtgacggcaag
gatgtcttcgtttcgggcatcatggagcatatcgaggaggccggcatccactcgggcgac
tccgcctgctcgctgccggtgcattcgctcggcacggacatggtcgacgaactggagcgt
cagacgggggcgctcgccagagcgctgaacgtcggcggcctgatgaacgtgcagttcgcc
atcaaggacggcaccatctatgtgctcgaagtaaacccgcgcgcctcacgcaccgttccc
ttcgtcgccaagacgatcggcgcgccgatcgccaagatcgccgcccgcgtcatggccggc
gaaatgctcgacgaggcgatcgccgcctatggcaagaagccgaatccgcgcaacctgaaa
catatcgccgtcaaggaggccgtcttccccttcgcccgcttcccgggcgtcgatacgctg
ctcggcccggaaatgcgttcgaccggcgaggtcatcgggctcgacaccgattatgcgctg
gcctttgccaagtcgcagctcggcgccggcgtcgacctgccgcgcgacggaacggtcttc
gtctcggttcgcgacgaggacaaggaacgggtgctgcccgcgatccgcattctctccgac
atcggcttcaaggtcatggcgaccggcggcacggcgcgcttcctcggcgagcagggcatc
gttgcaaccaagatcaacaaggtcctggaaggacggccacatgtcgaggacgccatccgc
aaccggcaggtccagctcgtgatcaacacgaccgacggcaacaaggcgatctccgactcg
aaatcgcttcgccgcgcgacgctgatgcagaaggtgccctattacaccacgatggccggc
gccgaggccgcggcactcgccatcaaggcactgaaggcgggcaacctcgaagtgcgtccg
ctgcagagctacttcgaaacctga
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