Sinorhizobium meliloti SM11: SM11_chr2028
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Entry
SM11_chr2028 CDS
T01885
Symbol
secD1
Name
(GenBank) bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx02024
Quorum sensing
smx03060
Protein export
smx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SM11_chr2028 (secD1)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SM11_chr2028 (secD1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM11_chr2028 (secD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smx02044
]
SM11_chr2028 (secD1)
Secretion system [BR:
smx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SM11_chr2028 (secD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
MMPL
SecD-TM1
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AEH79290
UniProt:
F7X0V3
LinkDB
All DBs
Position
complement(2006007..2008583)
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AA seq
858 aa
AA seq
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MPRLSPFKNILIWLVVLAGLAFALPNLLSREQLADWPTWLPHRQVPLGLDLRGGSHIVLK
VSREDIVAERLQSTIDTIADALRQADIRYTGLSGSGQGLQFRLRDATKAPAARDALKALV
APVRQGGLFGNSIQELVYEESATSDTLRLRLTDEGIDLRVSDAVAQSIEVVRRRVGEVIA
VVPIIERRGGDRLSVQVPGLDEPQRLKDLLGQRGDVALKWLDSSMPAQQAVDTRPPAGSE
VLYSLDDPPIPYLVERRAFAAAPDFVEAQPGFDPATSEPVVNARIAAGAAARVAPFLQSD
PRKQFAIVLDGQVISTSVLDGALSGDAVRISGNLSEDGANDLAALMRAGPLPVSLTVIEE
RTVGPEDGADAVANGLTAGLIAAIAVAACMIGFYGFFGVVAVIAVIVNVVLIIAVLSVTG
ATLTLPGIAGIILTIGIAVDSNVLIYERLREEARTSGKPLRRALDDGFERVLRSIVDANL
TIFIAGAILLYLGSGAIRGFAVTLAIGSVTTILTAHSLTRRLIRGWYRRRLPQRLPRGIR
TGFFSRADFRFMAIRNPVFILMTALSLASLVLLTSLGLNMGADFRGGSVIELRARTGVAD
GADIRARLDELNLGDVQVEELGSARDVLVRIPSQEAGDNAEQTAVGLVRSELEDQYVFRR
VEVVGPGVSGELTRAGSLAVAAAVLAVLLYVWLRFGRRFAVGAIVATLHDVLLTLGFLVL
TGIEFNLASIAALLTIVCYSLSDTMVIYDRVRENLVRYRRMPLSVLIDTSINQTLSRTVL
TAVTTLLALVALYLFGGSGLVQSFSATLIFGVLVGTVSSIYVAGPLLILFNRRNNRLGGT
QDPAEPDASSETEAKGAV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggttgtcgccgttcaagaatattctcatctggctggtcgtccttgcgggcctc
gccttcgcactgccgaatctcctttccagagagcagctcgcggactggccgacctggctg
ccgcatcggcaggtgccgctcgggctcgatctcaggggcggttcccatatcgtcctcaag
gtcagccgcgaagacatcgtcgcggagcgcctgcaatcgaccatcgacacgatcgccgat
gcgctgagacaggcggatatccgctatacggggctgtccggaagcgggcagggtctgcag
tttcgtctccgcgatgcaacgaaagcaccagcggcgcgtgacgcgctgaaggcgttggtc
gcccccgttcgacagggcgggcttttcgggaattccatccaggaactggtctacgaggaa
agcgcgaccagcgacacgcttcggcttcgcctgacggacgagggcatagatctgagggtc
tcagatgccgtcgcccagtccatcgaggtcgtacgccggcgtgtcggcgaagtcatcgcg
gtcgtgccgatcatagagcgtcgcggcggtgaccggctgagcgtgcaggtccccggtctg
gacgagccgcaaagattgaaggatctcctcgggcagcgaggagatgtcgccctgaagtgg
ctggattcctcgatgccagcacaacaggccgtcgatacgaggccgcctgcggggtccgag
gtcctctattcgctggacgatccgccgataccctacctcgtcgagagacgcgcctttgct
gcggcgccggacttcgtcgaggcacagccgggcttcgatccggcaacgagcgaacctgtc
gtcaatgcaaggattgcagccggggctgccgcgcgggtcgcgccgttcctgcagtcggat
ccgcggaagcagttcgcgatcgtgctcgacggacaggttatctcgacgtccgttctggat
ggcgcgctttccggtgatgccgtccggatttccggaaatctctcggaggacggggcgaac
gatcttgccgccctgatgcgggccggcccgcttcccgtttcgctgacggtcatcgaggag
cgcaccgtcggtcccgaggacggggctgacgccgttgcaaacggcctcacggcgggcctg
atcgcggccattgccgtagcagcctgtatgattggcttctacggcttcttcggtgtcgtg
gccgtcattgccgtcatcgtcaacgtcgtgctgatcatcgcggtcctgtccgtcaccggc
gccacgctgacgctgcccggaattgccgggatcatcctcacgatcggaattgcggtcgac
tcgaacgtgctcatctacgagcggctcagggaagaagcgcgcaccagcggcaaacccttg
cgaagggcgctggacgacggattcgagcgcgtcttgaggagcatcgtcgacgcgaatctg
acgatattcattgccggcgccatcctcctctatcttgggtcgggcgctattcggggtttt
gcggttacgcttgccatcggcagcgtcaccaccattctgacggcgcacagcctgacacgc
cgccttattcgcggatggtatcgccgccggctgccgcagcgtctgccgcgcggcattcgg
accggatttttcagccgggcggatttccgtttcatggcgatccgcaatccggtctttatt
cttatgacagcattgtcgcttgcttcgctggttctcctgacgagcctcgggctcaacatg
ggagcagatttcaggggcggctccgtcatcgaattgagagcacggaccggcgtcgccgat
ggtgccgacatccgtgcccgtctcgacgaattgaacctcggagacgttcaagtcgaggaa
cttggatcggcgcgagacgttctcgtccgtatcccgtcgcaggaagccggcgacaatgcc
gagcagacggccgtcgggctggttcgctccgaacttgaggatcaatatgtcttccggcgt
gtcgaggtggttggccccggtgtttccggagagttgacgcgggcagggtcgctcgccgtt
gccgcagccgtgctggccgttctgctttacgtgtggcttcggttcggccggcgatttgcc
gtcggagccatcgtcgcgacgttgcacgatgtgctgctgacgctcgggttcctcgttctg
accggcatcgaattcaatctcgccagcatcgcagcgctgctgacgatcgtgtgctactcg
ctgagcgacaccatggtgatttatgatcgagtccgggagaatctggtgcgctatcgaaga
atgccgctctctgtcctgatcgacacgtcgatcaaccagaccctgtcgcggaccgtcctg
accgccgtgacgacgctccttgctctcgttgcgctgtatctgttcggaggcagtggtctc
gtccaatccttcagcgcgacactcatattcggtgtgcttgtgggcaccgtgtcctcgatc
tatgtcgcgggaccgctgctcatcctcttcaatcgccgaaacaatcgtcttggaggcacg
caggacccggcggagccggatgcgtcgtcggagacggaagcaaagggtgcggtgtga
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