Sinorhizobium meliloti SM11: SM11_chr2118
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Entry
SM11_chr2118 CDS
T01885
Symbol
lpdA1
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00010
Glycolysis / Gluconeogenesis
smx00020
Citrate cycle (TCA cycle)
smx00260
Glycine, serine and threonine metabolism
smx00280
Valine, leucine and isoleucine degradation
smx00310
Lysine degradation
smx00380
Tryptophan metabolism
smx00620
Pyruvate metabolism
smx00630
Glyoxylate and dicarboxylate metabolism
smx00640
Propanoate metabolism
smx00670
One carbon pool by folate
smx00785
Lipoic acid metabolism
smx01100
Metabolic pathways
smx01110
Biosynthesis of secondary metabolites
smx01120
Microbial metabolism in diverse environments
smx01200
Carbon metabolism
smx01210
2-Oxocarboxylic acid metabolism
smx01240
Biosynthesis of cofactors
Module
smx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smx_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
smx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
smx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SM11_chr2118 (lpdA1)
00020 Citrate cycle (TCA cycle)
SM11_chr2118 (lpdA1)
00620 Pyruvate metabolism
SM11_chr2118 (lpdA1)
00630 Glyoxylate and dicarboxylate metabolism
SM11_chr2118 (lpdA1)
00640 Propanoate metabolism
SM11_chr2118 (lpdA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SM11_chr2118 (lpdA1)
00280 Valine, leucine and isoleucine degradation
SM11_chr2118 (lpdA1)
00310 Lysine degradation
SM11_chr2118 (lpdA1)
00380 Tryptophan metabolism
SM11_chr2118 (lpdA1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SM11_chr2118 (lpdA1)
00670 One carbon pool by folate
SM11_chr2118 (lpdA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smx04147
]
SM11_chr2118 (lpdA1)
Enzymes [BR:
smx01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SM11_chr2118 (lpdA1)
Exosome [BR:
smx04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SM11_chr2118 (lpdA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_binding_3
FAD_oxidored
NAD_binding_8
HI0933_like
DAO
GIDA
Amino_oxidase
2-Hacid_dh_C
Thi4
Lys_Orn_oxgnase
3HCDH_N
CDCA
Motif
Other DBs
NCBI-ProteinID:
AEH79380
UniProt:
F7X1K4
LinkDB
All DBs
Position
complement(2106371..2107816)
Genome browser
AA seq
481 aa
AA seq
DB search
MAENYDVIVVGSGPGGYVTAIRSAQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEIL
DHANHAKNYGLTLEGKITANVKDVVARSRGVSARLNGGVAFLMKKNKVDVIWGEAKLTKP
GEIVVGAPSKPAVQPQNPVPKGVKGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEEFPKSLLVMGSGAIGIEFASFYRSMGVDVTVVELLPQIMPVEDAEISAFARKQLE
KRGLKIITDAKVTKVEKGANDVTAHVETKDGKVTPIKADRLISAVGVQGNIENLGLEALG
VKTDRGCIVTDGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVICVEKIAGVPGVHALDKG
KIPGCTYCDPQVASVGLTEAKAKELGRDIRVGRYSFGANGKAIALGEDQGLIKTIFDKKT
GELIGAHMVGAEVTELIQGFVVAMNLETTEEELMHTVFPHPTLSEMMKESVLDAYGRVLN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaattacgacgttatcgttgtcggttcgggtccgggcggatacgtgaccgcc
attcgttcggcgcagctgggcttgaagacggcgatcgtcgagcgggagcatctgggcggg
atctgcctcaactggggctgcattccgaccaaggcgcttttgcgctccgccgaaattctc
gaccatgccaaccatgccaagaactacggcctgaccctcgaaggcaagatcaccgccaac
gtcaaggatgtcgttgcccgctcgcgcggtgtctccgcgcggctgaacggcggcgtcgcc
ttcctgatgaagaagaacaaggtggacgtgatctggggcgaggcgaagctcaccaaaccc
ggcgagatcgtcgtcggcgcgccgtccaagccagccgtccagccgcagaacccggttccg
aagggcgtcaagggagaggggacctatacggccaagcacatcatcgtcgcaaccggcgcg
cgcccgcgcgcgctccccggcatcgagccggacggcaagctgatctggacctatttcgag
gcgatgaagccggaggaattcccgaagtcgctgctcgtcatgggctccggcgcgatcggc
atcgaattcgcgagcttctaccgctcgatgggcgtcgacgtgaccgtcgtcgaactgctg
ccgcagatcatgccggtcgaggatgcggaaatttccgctttcgcccgtaagcagctcgaa
aagcgcggcctgaagatcatcaccgatgccaaggtgacgaaggtcgagaagggcgcgaac
gacgtcacggcgcatgttgagacgaaggacggcaaggtcacgccgatcaaggcggaccgt
ctgatctccgccgtcggcgttcagggcaacatcgagaatctcggcctcgaggccctcggc
gtgaagaccgaccgcggctgcatcgtcaccgatggctacggcaagaccaatgtcgcgggc
atctatgcgatcggcgacgtcgccgggccgccgatgctggcgcacaaggccgagcatgag
ggcgtcatctgcgtcgagaagattgccggggttcccggcgtgcacgcgcttgacaagggc
aagatcccgggctgcacctattgcgacccgcaggtcgcctccgtgggcctcacggaagcg
aaggccaaggaactcggccgcgacatccgcgtcggccgatacagcttcggcgcaaacggc
aaggcgatcgcgctcggcgaagaccagggcctgatcaagaccatcttcgacaagaagacc
ggcgaactgatcggcgcgcacatggtaggggccgaagtgaccgaactcatccagggcttc
gtcgtcgccatgaacctggagacgaccgaagaggaactgatgcacacggtgttcccgcac
ccgaccctttcggagatgatgaaggaaagcgtgctcgatgcctacggcagagtattgaac
gcctga
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