KEGG   Sinorhizobium meliloti SM11: SM11_chr2118
Entry
SM11_chr2118      CDS       T01885                                 
Symbol
lpdA1
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
smx  Sinorhizobium meliloti SM11
Pathway
smx00010  Glycolysis / Gluconeogenesis
smx00020  Citrate cycle (TCA cycle)
smx00260  Glycine, serine and threonine metabolism
smx00280  Valine, leucine and isoleucine degradation
smx00310  Lysine degradation
smx00380  Tryptophan metabolism
smx00620  Pyruvate metabolism
smx00630  Glyoxylate and dicarboxylate metabolism
smx00640  Propanoate metabolism
smx00670  One carbon pool by folate
smx00785  Lipoic acid metabolism
smx01100  Metabolic pathways
smx01110  Biosynthesis of secondary metabolites
smx01120  Microbial metabolism in diverse environments
smx01200  Carbon metabolism
smx01210  2-Oxocarboxylic acid metabolism
smx01240  Biosynthesis of cofactors
Module
smx_M00009  Citrate cycle (TCA cycle, Krebs cycle)
smx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smx_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
smx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
smx_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:smx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SM11_chr2118 (lpdA1)
   00020 Citrate cycle (TCA cycle)
    SM11_chr2118 (lpdA1)
   00620 Pyruvate metabolism
    SM11_chr2118 (lpdA1)
   00630 Glyoxylate and dicarboxylate metabolism
    SM11_chr2118 (lpdA1)
   00640 Propanoate metabolism
    SM11_chr2118 (lpdA1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SM11_chr2118 (lpdA1)
   00280 Valine, leucine and isoleucine degradation
    SM11_chr2118 (lpdA1)
   00310 Lysine degradation
    SM11_chr2118 (lpdA1)
   00380 Tryptophan metabolism
    SM11_chr2118 (lpdA1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SM11_chr2118 (lpdA1)
   00670 One carbon pool by folate
    SM11_chr2118 (lpdA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smx04147]
    SM11_chr2118 (lpdA1)
Enzymes [BR:smx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SM11_chr2118 (lpdA1)
Exosome [BR:smx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SM11_chr2118 (lpdA1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 FAD_oxidored NAD_binding_8 HI0933_like DAO GIDA Amino_oxidase 2-Hacid_dh_C Thi4 Lys_Orn_oxgnase 3HCDH_N CDCA
Other DBs
NCBI-ProteinID: AEH79380
UniProt: F7X1K4
LinkDB
Position
complement(2106371..2107816)
AA seq 481 aa
MAENYDVIVVGSGPGGYVTAIRSAQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEIL
DHANHAKNYGLTLEGKITANVKDVVARSRGVSARLNGGVAFLMKKNKVDVIWGEAKLTKP
GEIVVGAPSKPAVQPQNPVPKGVKGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEEFPKSLLVMGSGAIGIEFASFYRSMGVDVTVVELLPQIMPVEDAEISAFARKQLE
KRGLKIITDAKVTKVEKGANDVTAHVETKDGKVTPIKADRLISAVGVQGNIENLGLEALG
VKTDRGCIVTDGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVICVEKIAGVPGVHALDKG
KIPGCTYCDPQVASVGLTEAKAKELGRDIRVGRYSFGANGKAIALGEDQGLIKTIFDKKT
GELIGAHMVGAEVTELIQGFVVAMNLETTEEELMHTVFPHPTLSEMMKESVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgagaattacgacgttatcgttgtcggttcgggtccgggcggatacgtgaccgcc
attcgttcggcgcagctgggcttgaagacggcgatcgtcgagcgggagcatctgggcggg
atctgcctcaactggggctgcattccgaccaaggcgcttttgcgctccgccgaaattctc
gaccatgccaaccatgccaagaactacggcctgaccctcgaaggcaagatcaccgccaac
gtcaaggatgtcgttgcccgctcgcgcggtgtctccgcgcggctgaacggcggcgtcgcc
ttcctgatgaagaagaacaaggtggacgtgatctggggcgaggcgaagctcaccaaaccc
ggcgagatcgtcgtcggcgcgccgtccaagccagccgtccagccgcagaacccggttccg
aagggcgtcaagggagaggggacctatacggccaagcacatcatcgtcgcaaccggcgcg
cgcccgcgcgcgctccccggcatcgagccggacggcaagctgatctggacctatttcgag
gcgatgaagccggaggaattcccgaagtcgctgctcgtcatgggctccggcgcgatcggc
atcgaattcgcgagcttctaccgctcgatgggcgtcgacgtgaccgtcgtcgaactgctg
ccgcagatcatgccggtcgaggatgcggaaatttccgctttcgcccgtaagcagctcgaa
aagcgcggcctgaagatcatcaccgatgccaaggtgacgaaggtcgagaagggcgcgaac
gacgtcacggcgcatgttgagacgaaggacggcaaggtcacgccgatcaaggcggaccgt
ctgatctccgccgtcggcgttcagggcaacatcgagaatctcggcctcgaggccctcggc
gtgaagaccgaccgcggctgcatcgtcaccgatggctacggcaagaccaatgtcgcgggc
atctatgcgatcggcgacgtcgccgggccgccgatgctggcgcacaaggccgagcatgag
ggcgtcatctgcgtcgagaagattgccggggttcccggcgtgcacgcgcttgacaagggc
aagatcccgggctgcacctattgcgacccgcaggtcgcctccgtgggcctcacggaagcg
aaggccaaggaactcggccgcgacatccgcgtcggccgatacagcttcggcgcaaacggc
aaggcgatcgcgctcggcgaagaccagggcctgatcaagaccatcttcgacaagaagacc
ggcgaactgatcggcgcgcacatggtaggggccgaagtgaccgaactcatccagggcttc
gtcgtcgccatgaacctggagacgaccgaagaggaactgatgcacacggtgttcccgcac
ccgaccctttcggagatgatgaaggaaagcgtgctcgatgcctacggcagagtattgaac
gcctga

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