Sinorhizobium meliloti SM11: SM11_chr2468
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Entry
SM11_chr2468 CDS
T01885
Symbol
groEL2
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SM11_chr2468 (groEL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smx03019
]
SM11_chr2468 (groEL2)
03110 Chaperones and folding catalysts [BR:
smx03110
]
SM11_chr2468 (groEL2)
03029 Mitochondrial biogenesis [BR:
smx03029
]
SM11_chr2468 (groEL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smx04147
]
SM11_chr2468 (groEL2)
Enzymes [BR:
smx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SM11_chr2468 (groEL2)
Messenger RNA biogenesis [BR:
smx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SM11_chr2468 (groEL2)
Chaperones and folding catalysts [BR:
smx03110
]
Heat shock proteins
HSP60 / Chaperonin
SM11_chr2468 (groEL2)
Mitochondrial biogenesis [BR:
smx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SM11_chr2468 (groEL2)
Exosome [BR:
smx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SM11_chr2468 (groEL2)
Exosomal proteins of other body fluids (saliva and urine)
SM11_chr2468 (groEL2)
Exosomal proteins of breast cancer cells
SM11_chr2468 (groEL2)
Exosomal proteins of colorectal cancer cells
SM11_chr2468 (groEL2)
Exosomal proteins of bladder cancer cells
SM11_chr2468 (groEL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEH79721
UniProt:
F7X4D5
LinkDB
All DBs
Position
2430116..2431744
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFTSDARDRMLRGVDIMANAVRVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMLREVASRTSDIAGDGTTTATVLAQAIVREGAKAVASGMNPMDLKRGI
DLAVEAIVKELRNNARKVSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGVITVEEA
KTAEIELEVVEGMEFDRGYLSPYFITNQEKMRVELEDAYILLHEKKLSNLQAMIPILESV
IQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKSMLEDIAILTGGTV
ISEELGIKLENTTMDTLGRAKRIMVDKETTTIVDGAGSKEDIGGRVAQIKAQIEDTTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RVVSALNGLATANDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKQDFAFGWN
AQTGEFGDLFQMGVIDPAKVVRAALQDAASIAGLLVTTEAMIAEKPKKDGQPQMPPGGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtcaaattcaccagtgatgcccgcgatcggatgctgcgcggcgtg
gacatcatggccaacgcggtccgcgtgactttgggaccgaaggggcggaacgtcgtcatc
gacaagtccttcggtgcaccgcggatcaccaaggacggggtttcggtcgccaaggaaatc
gagctcgaggacaagttcgagaatatgggcgcgcagatgctgcgcgaagtggcgtcgcgc
accagcgacattgccggcgacggcaccaccactgccaccgtactcgcgcaggctatcgtt
agggagggcgccaaggccgtcgcatcgggaatgaacccgatggatctgaagcgcggcatc
gatcttgccgtcgaggcgatcgtcaaggaactcaggaacaatgcccgcaaggtctccaaa
aatgccgaaatcgcccaggtggcgacgatttcggccaatggcgatgccgaaatcggccgt
tacctggccgaagcgatggaaaaggtcggcaatgagggcgtgatcaccgtcgaggaggcc
aagaccgccgagatcgaactcgaagtcgtcgagggaatggagttcgatcggggatatcta
tccccctatttcatcaccaatcaggaaaagatgagggtggagctggaagacgcctacatc
ctgcttcacgagaagaagctctccaacctgcaggcgatgatcccaattctcgaatcggtc
atccagtccggcaagccgctcctgatcattgccgaagatgtcgagggagaggcgctcgcc
accctcgtcgtcaacaagcttcgcggcggcctgaagatcgctgcggtcaaggccccgggc
ttcggcgaccgtcgcaagtccatgctggaagatatcgcgatcctgaccggcggcaccgtc
atttccgaggaactcgggatcaagctcgaaaacaccacgatggataccctcggccgtgcg
aagcgcatcatggtggacaaggagacgacgacgatcgtcgacggcgccggatcgaaggag
gatatcggcggccgcgtcgcacagatcaaggcacagatcgaggacacgacctcggactat
gatcgagagaagttgcaggagcggctcgccaagctcgcgggcggcgtcgcggtcatccgc
gtcggcggctcgaccgaggtcgaagtcaaggagaagaaggaccgtgtcgacgatgcgctg
catgcaacgcgcgcggcggtcgaggaaggcattctgcccggcggcggcgtggcgctgctg
cgggtcgtgagcgcgctcaacggtcttgccaccgccaatgacgaccagcgcgtgggcatc
gagatcgtccgccgcgcaatcgaggcacccgtgcgtcagatcgccgagaacgccggcgcc
gagggatcgatcatagtcgggaagctgcgcgagaaacaggatttcgcctttggctggaac
gcccagactggagaattcggcgatctcttccaaatgggcgtcatcgatcccgcgaaggtc
gtgcgcgccgcgcttcaggacgctgcctccatcgccggtcttctcgtgacgacggaagcg
atgatcgccgagaaaccgaagaaggacgggcagccgcagatgccgcctggcggcggaatg
gacttctga
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