Sinorhizobium meliloti SM11: SM11_chr2473
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Entry
SM11_chr2473 CDS
T01885
Symbol
rnd
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smx03016
]
SM11_chr2473 (rnd)
Enzymes [BR:
smx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SM11_chr2473 (rnd)
Transfer RNA biogenesis [BR:
smx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SM11_chr2473 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
AEH79726
UniProt:
F7X4E0
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All DBs
Position
2437704..2438855
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AA seq
383 aa
AA seq
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MIQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDL
APFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN
RIKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEM
AILESRETYDLHPDNAWQRLKMRVKKPIELAVLQKVAAWREREARARNVPRGRIIKDDAI
YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG
AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEGEGADVAALKGWRRELFGMTAL
KLINGEVALRFVDKKVEAMEIGG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacgacagcagatcttgaggccgcctgccgagagctggcccgttcaagctat
attacgatcgatacggagttcctgcgcgaaaccacgttctggccggtgctgtgcctcatt
cagatggcaagcccggaaatggcagtgatcgtcgatccgatggcacccgggatcgacctc
gccccgttcttcgcgctgatgagcaacccggatgtcgtgaaggtgttccacgccgccagg
caggacatcgagatcatccaccatctcggaaatctcattcctcatccgatcttcgatacg
caggtggccgcgatggtttgcggcttcggtgacagcgtgtcctatgaccagctcgtcaac
cgcatcaagaacgagcagatcgacaagtcgtcccgcttcaccgattggagccgcagaccg
ctcaccgacaagcagctcgactatgcgctggcggacgtgacgcatctgagggatatctac
cagtacctcaccaaggaactggatcgcgagggacgctcctcatggcttgcggaggaaatg
gcgatcctcgaaagccgggagacctacgatctccacccggacaatgcctggcagcggctg
aagatgcgggtgaagaaacccatcgagctcgccgtcctgcagaaggtggcggcgtggcgc
gaacgcgaagcgcgcgcccgcaacgtgccgcgcgggcgaattatcaaggatgatgcgatc
tatgagattgcgcagcagcagccgaaggatgccgaggcgctcggacgcctcaggaccatt
cccaagggctgggagcgctccagcgcggggacggccctcatcgaggcagtcggcgaagcc
cttgcgatcccgaggggcgagctgccgcgcctgccgcgccagaaccacgcacccgagggc
gctgcggcggcgagcgagctgctcaaggtgctgctgaaactcatctccgaaaaggaggga
gtcgcggccaagatcatcgccaacagcgacgatctcgacaggatcgcagccgagggcgaa
ggtgcggacgtcgccgcgctcaagggctggcggcgtgagctcttcggcatgacggcgctg
aaactcatcaacggcgaggtggcattgcgcttcgtcgacaaaaaagtcgaggcgatggaa
atcggcggttga
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