Sinorhizobium meliloti SM11: SM11_chr2548
Help
Entry
SM11_chr2548 CDS
T01885
Symbol
choX
Name
(GenBank) ABC transporter, periplasmic solute-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SM11_chr2548 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smx02000
]
SM11_chr2548 (choX)
Transporters [BR:
smx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
SM11_chr2548 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AEH79801
UniProt:
F7X525
LinkDB
All DBs
Position
2520233..2521357
Genome browser
AA seq
374 aa
AA seq
DB search
MIRTLSLKFMLAGAVCMATLTAGSAFAAEPESCGTVRFSDVGWTDITATTATATTILEAL
GYETDVKVLSVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYT
LATNAKGAELGIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVE
SSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVR
AGYTTECPNVGKLLQNLSFSLQMENEIMGKILNDGEDPEKAAAAWLKDNPQSIEPWLSGW
RPRMAATDWPRSRPPSASDRRQITRSILNCCMFHAQIGSDMGNAVRRGNTPPFFHRSSDL
SVDPGKRDPVSWNS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgataaggacgctttctctcaaattcatgctggcgggagccgtttgcatggcaaccctg
accgccggaagcgcttttgcagccgagccggaaagctgcggcaccgtccgcttctccgac
gtcggctggaccgacatcacagcgacgacggcgaccgcgacgaccatcctcgaggcgctc
ggctacgagacggacgtgaaggtgctgtcggtgccggttacctacacatcgctgaagaac
aaggacatcgacgtcttcctcggcaactggatgccgaccatggaagcggatatcgccccc
taccgcgaggataaatccgtcgagacggtgcgcgaaaacctcgcaggcgcgaaatacacg
cttgcgaccaatgccaagggcgcggagctcggcatcaaggacttcaaggatatcgctgcc
cacaaggacgagctcgacggcaagatctacggcatcgaaccgggcaatgacggcaaccgc
ctgatcatcgacatggtcgaaaaaggcaccttcgatctcaagggcttcgaagtcgtcgaa
tcctccgagcaggggatgctggcccaggtcgcccgcgccgaaaagtccggcgacccgatc
gtcttcctcggatgggaaccgcatccgatgaacgccaatttcaagctcacctatctttcc
ggcggcgatgacgtattcggcccgaattacggcggcgcgactgtgcacaccaatgtgcgc
gccggatacacgaccgaatgcccgaatgtcggcaagctgctccagaatctctcgttctcc
ctccagatggagaacgagatcatgggcaagatcctcaacgacggtgaagacccggagaaa
gctgcggccgcgtggttgaaggacaatccgcagagcatcgaaccctggctttcggggtgg
cgaccaaggatggcggcgacggactggccgcggtcaaggccgccctcggcctctgatcgg
cggcagatcacgcgtagcattttgaattgctgcatgttccatgctcaaatcggctccgat
atgggaaatgcagtgaggcggggaaacaccccgccttttttccaccggtcttccgacctg
agtgttgaccctggcaagagggaccctgtttcgtggaattcctga
DBGET
integrated database retrieval system
