Sinorhizobium meliloti SM11: SM11_chr2913
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Entry
SM11_chr2913 CDS
T01885
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SM11_chr2913 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smx03400
]
SM11_chr2913 (ruvB)
Enzymes [BR:
smx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM11_chr2913 (ruvB)
DNA repair and recombination proteins [BR:
smx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SM11_chr2913 (ruvB)
RecFOR pathway proteins
SM11_chr2913 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_3
AAA_16
AAA_22
Rad17
AAA_2
nSTAND3
AAA_18
AAA_17
RNA_helicase
AAA_33
AAA_28
TsaE
NTPase_1
AAA_24
DUF815
IstB_IS21
ABC_tran
NB-ARC
Cytidylate_kin
AAA_7
Sigma54_activ_2
NACHT
DUF6189
Motif
Other DBs
NCBI-ProteinID:
AEH80158
UniProt:
F7X894
LinkDB
All DBs
Position
complement(2888644..2889684)
Genome browser
AA seq
346 aa
AA seq
DB search
MSEAARLIAPEKRGEDLDATMRPQTLDEFTGQAEARANLKIFIEAARNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLN
FYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TLKIADEALTRLLVDSMGLDQLDRRYLTMIAQNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYLIQQGFIQRTPRGRVLTANAWKHLGLNPPRDVEASQFRLTLEDD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccgcacgtctgatcgcgccggaaaagcgaggcgaagacctcgatgcgacc
atgcgcccgcagacgctcgacgagttcaccggccaggctgaagcccgcgccaatctgaag
atcttcatcgaggcggcgcgcaatcgcggcgaagcgctcgaccacgtgctcttcgtcggc
ccgcccgggctcggcaagacgacgctggcgcagatcatggcaaaggagctcggcgtcaat
tttcgctcgacttccggcccggtgatcgccaaggccggtgaccttgcggcgctgctcacc
aatctcgaagagcgcgacgtgctcttcatcgatgaaatccaccgcctcaatccggccgtc
gaggaaatcctctatccggccatggaggatttccagctcgacctcatcatcggcgagggg
ccggcggcccgttcggtgaagatcgatctcgcaaagttcaccctcgtggcggcgacgacg
cgcctcggactgctgacgacgccgctgcgcgatcgcttcggcatccccgtgcggctcaat
ttctatacggtcgaggagttggagctgatcgtccggcgtggcgcgcggctgatgggtctc
ggcatgaccgacgaaggcgcgcgcgagattgcccgccgggcgcgcggaacgccccgcatc
gccggccgcctcctgcgccgggtgcgcgacttcgccgaggtcgcacgggcggaggccgtg
acgctaaagattgccgacgaggcgctgacccggctgctcgtcgacagcatgggtctcgac
cagctcgaccggcgctatctgacgatgatcgcccagaatttcggcggcgggccggtgggg
atcgagacgatcgccgccgggctttccgagccgcgcgacgcgatcgaagacatcatcgag
ccctatctgatccagcagggcttcatccagcgcacgccgcgtggccgcgtgctcacggcg
aatgcttggaagcatctcggcctcaatccgccacgggatgtcgaggcaagccaattccgg
ctgacgctcgaggacgactga
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integrated database retrieval system
