Sinorhizobium meliloti SM11: SM11_chr3218
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Entry
SM11_chr3218 CDS
T01885
Symbol
priA
Name
(GenBank) probabable primosomal protein N' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SM11_chr3218 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smx03400
]
SM11_chr3218 (priA)
Enzymes [BR:
smx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM11_chr3218 (priA)
DNA repair and recombination proteins [BR:
smx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SM11_chr3218 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
Zn_ribbon_Com
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AEH80455
UniProt:
F7X0B9
LinkDB
All DBs
Position
complement(3229859..3232063)
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AA seq
734 aa
AA seq
DB search
MTLDSTDLFGPVLDRRVVPVLVPMPAPRAYSYAVPDGMAVEPGSIVQVPLGPRFVVGVVW
DGEDDGGVDPKKLKQIEKVFDCPPLGPDMRAFLDWVAAYTLTPPGLVVRMALRAPTAFDP
EPMVEALRLTEMRPERMTAARERVLATASDGLSWTRSGLAHAAGVSSSVIDGLTSQGVFE
TVFMPPPPVVAAPDPAFAAPRLEGPQKQAAADLLAAVEERKFSVSLIDGITGSGKTEVYF
EAIAATLRAGKQVLILLPEIALTASFLERFQDRFGAKPAEWHSDLAPRMREKVWRQVTTG
QVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGNFPVVLV
SATPSVESRVNGEVGRYRPIHLPTRFGDAALPDLGIVDMRRHPPERGGFLSPVLVNQIGK
TIGRREQALLFLNRRGYAPLTLCRVCGHRFQCPDCSSWLVEHRFRGQIQCHHCGYSERTP
EACPECGTLDHLVACGPGVERIAEEVERHFPDARTIVLSSDLMGVKRLRLELEAIARGEA
DIVIGTQLVAKGHNFPNMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTGLKSL
GLLQTYQPQHPVMQAIVSGDSDAFYEREIHERERAVLPPFGRLASVIVSADTRGDAEGHA
RGLRNAAPRVDGIAILGPAEAPLALIRGRHRFRLLVHGRRNSDMQSFVRAMIAAGPKERG
SVSVQLDIDPQSFL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgattcaaccgatttattcggccccgtactcgaccgccgggtggtgcccgtc
ctggtgcccatgccggcgccgagggcctattcctacgcggtgcccgacggcatggcggtc
gagccgggatcgatcgtgcaggtgccgctcggcccccgtttcgtcgtcggcgtcgtctgg
gacggcgaagacgacggcggcgtcgatccgaagaagctgaagcagatcgagaaggtcttc
gactgcccgccgctcggcccggacatgcgcgcctttctcgattgggtggccgcctatacg
ctgacgccgcctggcctcgtcgtccggatggcgctccgggcgccgaccgccttcgatccg
gagccgatggtggaagccctgcgcctgaccgagatgcggccggaacggatgactgcggcg
cgcgagcgcgtcctcgccacggcgagcgacgggctttcctggacccgctcggggcttgcc
catgccgccggggtctcgtccagcgtcatcgacggcctgacgtcgcagggcgtgttcgaa
accgtcttcatgccgccgccgcccgtcgtcgccgcgccggatccagctttcgccgcgccg
cgcctcgaaggcccccagaagcaggcggctgcggatcttctggcggctgtcgaggagcgg
aaattctcggtatcgctgatcgacggcatcaccggttccggcaagacggaggtctatttc
gaggcgatagcggcgacgttgcgcgccggcaagcaggtcctgatcctgctgccggagatc
gcgctgaccgcaagcttcctcgaacgcttccaggaccgcttcggcgcgaagcccgcggag
tggcactccgatctcgcgccgcgcatgcgggaaaaggtctggcggcaggtgacgacgggc
caggtgcgcgtcgtcgccggtgcccgctcggcgctgttcctgcctttcgaggatctcggc
ctcatcatcgtcgacgaggagcacgaccccgcctacaagcaggaggaccgtgtcttctat
aatgcgcgcgatatggccgtggtgcgcgggcggatcggcaactttccggtcgtgctcgtc
tccgccacgccttcggtggagagccgggtgaacggcgaggtggggcgttaccggccgatc
catctgcccacccgcttcggcgatgcggcgctccccgatctcggcatagtcgacatgcgc
cgccatccgccggaacgcggcggctttctctcgccggtgctcgtgaaccagatcggcaag
acgatcggccggcgcgagcaggcgctcctgttcctgaaccggcgcggctacgcaccgctg
acgctctgccgcgtatgcggccatcgcttccaatgcccggattgctcgagctggctggtc
gagcaccgcttccgcggccagatccagtgccatcactgcggctactctgaacggactccg
gaagcctgcccggaatgcggcacgctcgatcatctcgttgcctgcggccccggggtcgag
cgcatcgccgaagaggtcgagcggcactttcccgacgcgcgcaccatcgtgctctcctcc
gatctgatgggggtcaagcggctgcggctggagctcgaggcaatcgcccgcggggaggcg
gacatcgtcatcggcacgcaactcgtcgccaaggggcacaacttcccgaacatgaccctg
gtcggcatcgtcgatgcggatctgggtcttgccaatggcgacccgcgcgctgcggaacgg
acgttccagctcctttcccaggtgacgggacgtgccggacggacgggactcaaaagcctc
ggccttctgcagacctatcagccgcagcatccggtcatgcaggcgatcgtgtccggcgat
tccgacgctttctacgaacgcgagatccatgagcgggaaagggcggtgctgcctcctttc
ggccggctcgcctcggtcatcgtttcggccgatacgcgcggcgatgccgagggccacgcc
cgcggactgcgcaatgccgcgccgcgcgtcgacggcatcgcgatcctcggaccggcggaa
gcgccgctcgcgcttatccgcggccggcatcgcttccggcttctcgtccacgggcggcgc
aacagcgacatgcagtccttcgtccgggctatgatcgccgccggccccaaggagcgcgga
tcggtcagcgtccagctcgacatcgatccgcagagttttttgtga
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