Sinorhizobium meliloti SM11: SM11_chr3248
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Entry
SM11_chr3248 CDS
T01885
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00020
Citrate cycle (TCA cycle)
smx00190
Oxidative phosphorylation
smx00650
Butanoate metabolism
smx00720
Other carbon fixation pathways
smx01100
Metabolic pathways
smx01110
Biosynthesis of secondary metabolites
smx01120
Microbial metabolism in diverse environments
smx01200
Carbon metabolism
Module
smx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smx_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SM11_chr3248 (sdhB)
00650 Butanoate metabolism
SM11_chr3248 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SM11_chr3248 (sdhB)
00720 Other carbon fixation pathways
SM11_chr3248 (sdhB)
Enzymes [BR:
smx01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SM11_chr3248 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
AEH80485
UniProt:
F7X0E9
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All DBs
Position
complement(3264242..3265021)
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AA seq
259 aa
AA seq
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MVELALPKNSQITEGKVWPKPVGAANLREYRVYRWNPDDGKNPRIDTYYIDIDDCGPMVL
DGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEVKGAVKVYPLPHMP
VVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAKEWRQSHEDRLKLDGLYECILCACCSTSC
PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKG
LNPAKAIGEIKKMLVERRF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggttgaactcgctctccccaagaactcgcagatcaccgaaggcaaggtgtggccgaaa
ccggtcggcgcggcgaacctgcgcgaataccgggtctatcgctggaatccggacgacggc
aaaaacccgcggatcgatacctattacatcgatatcgacgattgcggcccgatggttctg
gacggtctgctctacatcaagaacaatatcgatccgacgctgacgctgcgtcgctcctgc
cgcgaaggcatttgcggctcctgtgcgatgaatatcgacggcaccaatacgctcgcctgc
accaagggcatggatgaggtgaagggcgccgtgaaggtgtatccgctgccgcatatgccc
gtcgtcaaggacctcgtgcctgacctcaccaatttctatgcccagcaccgttcgatcgag
ccctggctgaagacggtgtcgccgacaccggccaaggaatggcggcagagccacgaagac
cgcctcaagctcgacgggctctatgagtgcattctctgcgcctgctgctcgacctcctgt
cccagctactggtggaacggcgaccgctatctcggccctgccgtcctcctgcaggcctat
cgctggctcatcgactccagggacgaggcgaccggcgagcgtctcgacaatctcgaagat
ccgttccggctctatcgctgccacacaatcatgaactgcgcccaggcctgtccgaagggg
ttgaaccccgccaaggcgatcggcgagatcaagaagatgctggtcgagcggcggttctga
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